RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 AFPP02771 609 aaKnown RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 C8AP07357 584 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 EEF1GP26641 437 aaKnown RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 MTHFRP42898 656 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 ASPAP45381 313 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 ARPP19P56211 112 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 NOP14P78316 857 aaKnown RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 ADCY1Q08828 1119 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 MAPRE1Q15691 268 aaKnown RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 INTS6LQ5JSJ4 861 aaKnown RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 PPM1LQ5SGD2 360 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 SMYD5Q6GMV2 418 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 UNC93AQ86WB7 457 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 TTC39CQ8N584 583 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 SPPL2BQ8TCT7 592 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 ZNF707Q96C28 371 aaPredicted RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 TMEM209Q96SK2 561 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 MRPL45Q9BRJ2 306 aaKnown RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 FUCA2Q9BTY2 467 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 NAT10Q9H0A0 1025 aaKnown RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 SNX25Q9H3E2 840 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 MMRN2Q9H8L6 949 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 APOBEC3GQ9HC16 384 aaKnown RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 ABCB6Q9NP58 842 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 PRKAG3Q9UGI9 489 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 USP15Q9Y4E8 981 aaPredicted RBP15.48■□□□□ 0.07
DDX54-203ENST00000546869 BRWD1Q9NSI6 2320 aa15.48■□□□□ 0.07
DDX54-203ENST00000546869 RFPL2O75678 378 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 SEC24AO95486 1093 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 OR4Q2P0C623 313 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 LMO2P25791 158 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 TUFMP49411 452 aaKnown RBP15.47■□□□□ 0.07
DDX54-203ENST00000546869 KCNQ1P51787 676 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 INCA1Q0VD86 236 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 CFAP221Q4G0U5 840 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 SLC39A12Q504Y0 691 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 RARS2Q5T160 578 aaKnown RBP15.47■□□□□ 0.07
DDX54-203ENST00000546869 CDKAL1Q5VV42 579 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 C11orf57Q6ZUT1 292 aaPredicted RBP15.47■□□□□ 0.07
DDX54-203ENST00000546869 CRYBG2Q8N1P7 616 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 C12orf76Q8N812 135 aaPredicted RBP15.47■□□□□ 0.07
DDX54-203ENST00000546869 EHBP1Q8NDI1 1231 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 OR6B3Q8NGW1 331 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 LMO3Q8TAP4 145 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 SLC7A14Q8TBB6 771 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 FUBP3Q96I24 572 aaKnown RBP eCLIP15.47■□□□□ 0.07
DDX54-203ENST00000546869 PI4K2AQ9BTU6 479 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 NIF3L1Q9GZT8 377 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 CYP4F11Q9HBI6 524 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 POLIQ9UNA4 740 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 NFE2L3Q9Y4A8 694 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 REV3LO60673 3130 aa15.47■□□□□ 0.07
DDX54-203ENST00000546869 TSC2P49815 1807 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 GTPBP10A4D1E9 387 aaKnown RBP15.46■□□□□ 0.07
DDX54-203ENST00000546869 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 XYLBO75191 536 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 LRRN2O75325 713 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 CAVIN2O95810 425 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 CDH8P55286 799 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 MYL5Q02045 173 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 PLD1Q13393 1074 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 CBX2Q14781 532 aaPredicted RBP15.46■□□□□ 0.07
DDX54-203ENST00000546869 NFKBIBQ15653 356 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 CLUL1Q15846 466 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 SPOPLQ6IQ16 392 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 TMC5Q6UXY8 1006 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 MYCBPAPQ8TBZ2 947 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 TNIP3Q96KP6 325 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 SYT15Q9BQS2 421 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 SDCBP2Q9H190 292 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 DNAJC25Q9H1X3 360 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 SMYD3Q9H7B4 428 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 AVENQ9NQS1 362 aaPredicted RBP15.46■□□□□ 0.07
DDX54-203ENST00000546869 SAMSN1Q9NSI8 373 aaKnown RBP15.46■□□□□ 0.07
DDX54-203ENST00000546869 MAGEC2Q9UBF1 373 aaPredicted RBP15.46■□□□□ 0.07
DDX54-203ENST00000546869 GTF3C4Q9UKN8 822 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 PCDHB5Q9Y5E4 795 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 INSL5Q9Y5Q6 135 aa15.46■□□□□ 0.07
DDX54-203ENST00000546869 MTCL1Q9Y4B5 1905 aaKnown RBP15.45■□□□□ 0.06
DDX54-203ENST00000546869 MYBPHLA2RUH7 354 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 LRRC10BA6NIK2 292 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 A8MXQ7 604 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 PRRG1O14668 218 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 PTPN1P18031 435 aaKnown RBP15.45■□□□□ 0.06
DDX54-203ENST00000546869 DUSP4Q13115 394 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 MAN2A1Q16706 1144 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 TCP11X2Q5H9J9 407 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 C4orf50Q6ZRC1 276 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 ATAD1Q8NBU5 361 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 SMG7Q92540 1137 aaKnown RBP15.45■□□□□ 0.06
DDX54-203ENST00000546869 CEP295NLQ96MC4 621 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 TUBGCP2Q9BSJ2 902 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 PHF7Q9BWX1 381 aaPredicted RBP15.45■□□□□ 0.06
DDX54-203ENST00000546869 CRISPLD1Q9H336 500 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 WDR6Q9NNW5 1121 aaKnown RBP15.45■□□□□ 0.06
DDX54-203ENST00000546869 CRTAC1Q9NQ79 661 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 TMLHEQ9NVH6 421 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 ASB3Q9Y575 518 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 NME7Q9Y5B8 376 aa15.45■□□□□ 0.06
DDX54-203ENST00000546869 PLXNA3P51805 1871 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms