RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.45□□□□□ -0.1
RAB5B-203ENST00000546810 SEMA4GQ9NTN9 838 aa14.45□□□□□ -0.1
RAB5B-203ENST00000546810 DMAC2Q9NW81 257 aa14.45□□□□□ -0.1
RAB5B-203ENST00000546810 CASTOR2A6NHX0 329 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 PPP1R3GB7ZBB8 358 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 TADA2AO75478 443 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 LETM1O95202 739 aaPredicted RBP14.44□□□□□ -0.1
RAB5B-203ENST00000546810 HOXB3P14651 431 aaPredicted RBP14.44□□□□□ -0.1
RAB5B-203ENST00000546810 BMP6P22004 513 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 RPL9P32969 192 aaKnown RBP14.44□□□□□ -0.1
RAB5B-203ENST00000546810 PSMC2P35998 433 aaKnown RBP14.44□□□□□ -0.1
RAB5B-203ENST00000546810 NLRP12P59046 1061 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 NTHL1P78549 312 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 SHC2P98077 582 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 FKBP3Q00688 224 aaKnown RBP14.44□□□□□ -0.1
RAB5B-203ENST00000546810 PAK1Q13153 545 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 ZCWPW2Q504Y3 356 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 JADE1Q6IE81 842 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 CAVIN1Q6NZI2 390 aaKnown RBP14.44□□□□□ -0.1
RAB5B-203ENST00000546810 FOXR2Q6PJQ5 311 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 ZNF852Q6ZMS4 543 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 PRR23BQ6ZRT6 265 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 RBM43Q6ZSC3 357 aaKnown RBP14.44□□□□□ -0.1
RAB5B-203ENST00000546810 NELFBQ8WX92 580 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 KXD1Q9BQD3 176 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 CHST7Q9NS84 486 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 FNIP2Q9P278 1114 aa14.44□□□□□ -0.1
RAB5B-203ENST00000546810 MRPS17Q9Y2R5 130 aaKnown RBP14.44□□□□□ -0.1
RAB5B-203ENST00000546810 R3HCC1Q9Y3T6 440 aaKnown RBP14.44□□□□□ -0.1
RAB5B-203ENST00000546810 MAPK13O15264 365 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 MEFVO15553 781 aaPredicted RBP14.43□□□□□ -0.1
RAB5B-203ENST00000546810 GDF9O60383 454 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 FGFR1OPO95684 399 aaKnown RBP14.43□□□□□ -0.1
RAB5B-203ENST00000546810 TMEM191BP0C7N4 346 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 EPB41P11171 864 aaKnown RBP14.43□□□□□ -0.1
RAB5B-203ENST00000546810 TDGF1P13385 188 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 KRT13P13646 458 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 CD44P16070 742 aaKnown RBP14.43□□□□□ -0.1
RAB5B-203ENST00000546810 PAX3P23760 479 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 TFAMQ00059 246 aaKnown RBP14.43□□□□□ -0.1
RAB5B-203ENST00000546810 SPAG1Q07617 926 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 CYP24A1Q07973 514 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 ADCY1Q08828 1119 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 FZD5Q13467 585 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 PSMD6Q15008 389 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 NAB2Q15742 525 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 ZBTB6Q15916 424 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 CSRP2Q16527 193 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 CT47A1Q5JQC4 288 aaPredicted RBP14.43□□□□□ -0.1
RAB5B-203ENST00000546810 N4BP2L1Q5TBK1 243 aaPredicted RBP14.43□□□□□ -0.1
RAB5B-203ENST00000546810 SPATA1Q5VX52 437 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 ANKRD40Q6AI12 368 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 ZSWIM2Q8NEG5 633 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 ANKRD36BP1Q96IX9 119 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 B3GALT6Q96L58 329 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 CXCL16Q9H2A7 254 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 PDE11AQ9HCR9 933 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 CTNND2Q9UQB3 1225 aa14.43□□□□□ -0.1
RAB5B-203ENST00000546810 F8W810 466 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 TMEM189-UBE2V1I3L0A0 370 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 PODXLO00592 558 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 TRAPPC3O43617 180 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 B3GAT3O94766 335 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 TNNC2P02585 160 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 PROS1P07225 676 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 NFICP08651 508 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 RPL17P18621 184 aaKnown RBP14.42□□□□□ -0.1
RAB5B-203ENST00000546810 TNNI1P19237 187 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 LRPAP1P30533 357 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 CLCNKBP51801 687 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 AP3M2P53677 418 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 CREMQ03060 361 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 ELAVL2Q12926 359 aaKnown RBP14.42□□□□□ -0.1
RAB5B-203ENST00000546810 PPP2R5DQ14738 602 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 UPP1Q16831 310 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 DUOXA2Q1HG44 320 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 IL31Q6EBC2 164 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 INTS8Q75QN2 995 aaKnown RBP14.42□□□□□ -0.1
RAB5B-203ENST00000546810 WDR49Q8IV35 697 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 GPR65Q8IYL9 337 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 FAM186BQ8IYM0 893 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 ITFG1Q8TB96 612 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 C18orf25Q96B23 403 aaPredicted RBP14.42□□□□□ -0.1
RAB5B-203ENST00000546810 CEP63Q96MT8 703 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 MKNK1Q9BUB5 465 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 ANO10Q9NW15 660 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 TMEM63CQ9P1W3 806 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 TUBGCP4Q9UGJ1 667 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 RWDD2AQ9UIY3 292 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 ADAM28Q9UKQ2 775 aa14.42□□□□□ -0.1
RAB5B-203ENST00000546810 SF3B1O75533 1304 aaKnown RBP eCLIP14.41□□□□□ -0.13e-9■■■■■ 93.6
RAB5B-203ENST00000546810 TRIM49BA6NDI0 452 aa14.41□□□□□ -0.1
RAB5B-203ENST00000546810 SLC16A3O15427 465 aaKnown RBP14.41□□□□□ -0.1
RAB5B-203ENST00000546810 FOXD2O60548 495 aaPredicted RBP14.41□□□□□ -0.1
RAB5B-203ENST00000546810 HNRNPA1P09651 372 aaKnown RBP eCLIP14.41□□□□□ -0.1
RAB5B-203ENST00000546810 DLATP10515 647 aaKnown RBP14.41□□□□□ -0.1
RAB5B-203ENST00000546810 SOX4Q06945 474 aaPredicted RBP14.41□□□□□ -0.1
RAB5B-203ENST00000546810 ENPEPQ07075 957 aa14.41□□□□□ -0.1
RAB5B-203ENST00000546810 SIM2Q14190 667 aaPredicted RBP14.41□□□□□ -0.1
RAB5B-203ENST00000546810 TPD52L1Q16890 204 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms