RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CYP2J2P51589 502 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 OSTNP61366 133 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 SNRPFP62306 86 aaKnown RBP6.88□□□□□ -1.31
PRKDC-211ENST00000546304 FAM189BP81408 668 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 PAK1Q13153 545 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 STX1AQ16623 288 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 KYAT1Q16773 422 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 SKOR2Q2VWA4 1001 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-211ENST00000546304 ZCWPW2Q504Y3 356 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 CLLU1OSQ5K130 101 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 ZBTB41Q5SVQ8 909 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 SLFN12LQ6IEE8 588 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 KLHL10Q6JEL2 608 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 GLB1LQ6UWU2 654 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 MRPL10Q7Z7H8 261 aaKnown RBP6.88□□□□□ -1.31
PRKDC-211ENST00000546304 C12orf56Q8IXR9 622 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 THNSL1Q8IYQ7 743 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 ABI1Q8IZP0 508 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 ADSSL1Q8N142 457 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 LRRC43Q8N309 656 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 PHOSPHO2Q8TCD6 241 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 RSPH1Q8WYR4 309 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 TOP1MTQ969P6 601 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 NXPE3Q969Y0 559 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 PGBD4Q96DM1 585 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 SAAL1Q96ER3 474 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 SNX27Q96L92 541 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 RPS6KC1Q96S38 1066 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 CCDC94Q9BW85 323 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-211ENST00000546304 MRPL9Q9BYD2 267 aaKnown RBP6.88□□□□□ -1.31
PRKDC-211ENST00000546304 TMEM117Q9H0C3 514 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 KCTD10Q9H3F6 313 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 RSAD1Q9HA92 442 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 TOPORSQ9NS56 1045 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-211ENST00000546304 RNF19AQ9NV58 838 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 HSPBP1Q9NZL4 362 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 CGNQ9P2M7 1197 aaKnown RBP6.88□□□□□ -1.31
PRKDC-211ENST00000546304 AGO2Q9UKV8 859 aaKnown RBP6.88□□□□□ -1.31
PRKDC-211ENST00000546304 INPP5FQ9Y2H2 1132 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 PCDHB7Q9Y5E2 793 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 MYO7AQ13402 2215 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 SCN1AP35498 2009 aa6.88□□□□□ -1.31
PRKDC-211ENST00000546304 BRWD1Q9NSI6 2320 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 PRUNE2Q8WUY3 3088 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 TRIM49BA6NDI0 452 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 TBKBP1A7MCY6 615 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 GRXCR1A8MXD5 290 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 PDXKO00764 312 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 CLIC2O15247 247 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 INPPL1O15357 1258 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 CALUO43852 315 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 EXTL3O43909 919 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 DGKIO75912 1065 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 NR3C1P04150 777 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 CLTAP09496 248 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 NR2F2P24468 414 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 AKAP5P24588 427 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 TNFSF9P41273 254 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 SCNN1GP51170 649 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 RABGGTBP53611 331 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 PMS1P54277 932 aaKnown RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 YARSP54577 528 aaKnown RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 NLRP12P59046 1061 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 HTRA4P83105 476 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 LRRC63Q05C16 580 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 PPP2R3AQ06190 1150 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 GRIK3Q13003 919 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 HSP90AA2PQ14568 343 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 ENOX2Q16206 610 aaKnown RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 EDRF1Q3B7T1 1238 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 PAN2Q504Q3 1202 aaKnown RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 SEZ6Q53EL9 994 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 GLRA4Q5JXX5 417 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 TXNDC11Q6PKC3 985 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 SASS6Q6UVJ0 657 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 AGMOQ6ZNB7 445 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 CBWD2Q8IUF1 395 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 BRSK2Q8IWQ3 736 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 TMEM192Q8IY95 271 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 CMTR2Q8IYT2 770 aaKnown RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 GPD1LQ8N335 351 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 MLKLQ8NB16 471 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 XXYLT1Q8NBI6 393 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 URGCPQ8TCY9 931 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 NOC3LQ8WTT2 800 aaKnown RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 NELFBQ8WX92 580 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 P2RX5Q93086 422 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 TP53INP1Q96A56 240 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 DHTKD1Q96HY7 919 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 HHIPQ96QV1 700 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 FAM129BQ96TA1 746 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 GAD1Q99259 594 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 TSG101Q99816 390 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 FAM213AQ9BRX8 229 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 BHLHE41Q9C0J9 482 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-211ENST00000546304 UBN1Q9NPG3 1134 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 SNTG2Q9NY99 539 aa6.87□□□□□ -1.31
PRKDC-211ENST00000546304 RBAKQ9NYW8 714 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms