RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 CYP4A22Q5TCH4 519 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 DACT3Q96B18 629 aaPredicted RBP12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 AP3B1O00203 1094 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 GPD1P21695 349 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 NSUN2Q08J23 767 aaKnown RBP eCLIP12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 TRADDQ15628 312 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 GALNT4Q8N4A0 578 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 AGAP3Q96P47 875 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 RTFDC1Q9BY42 306 aaPredicted RBP12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 CCDC90BQ9GZT6 254 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 PIK3CDO00329 1044 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 UGP2Q16851 508 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 NAIF1Q69YI7 327 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 CEP19Q96LK0 163 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 E7ENQ6 273 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 EPHB6O15197 1021 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 TM9SF1O15321 606 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 SEC24DO94855 1032 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 PYGMP11217 842 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 HNRNPH3P31942 346 aaKnown RBP12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 ALDH5A1P51649 535 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 PRAMEP78395 509 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 MXD4Q14582 209 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 TMEM120AQ9BXJ8 343 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 DCLK3Q9C098 648 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 VPS33BQ9H267 617 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 TASP1Q9H6P5 420 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 METTL5Q9NRN9 209 aaKnown RBP12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 IL1RAPL1Q9NZN1 696 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 NDUFA13Q9P0J0 144 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 TYW5A2RUC4 315 aaKnown RBP12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 TULP2O00295 520 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 RARAP10276 462 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 GNAT1P11488 350 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 RBP5P82980 135 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 CLEC16AQ2KHT3 1053 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 DDIASQ8IXT1 998 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 MRGBPQ9NV56 204 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 PKD2L2Q9NZM6 624 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 CDYLQ9Y232 598 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 DTNAQ9Y4J8 743 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 ANGPT2O15123 496 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 PRKCIP41743 596 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 USP10Q14694 798 aaKnown RBP12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 COG2Q14746 738 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 OLFML2BQ68BL8 750 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 VGLL2Q8N8G2 317 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 RDM1Q8NG50 284 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 OR6P1Q8NGX9 317 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 KRT35Q92764 455 aa12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 C20orf96Q9NUD7 363 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-204ENST00000546276 AKAP10O43572 662 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 GRAP2O75791 330 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 POLBP06746 335 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 ZCCHC18P0CG32 403 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 PPARGP37231 505 aaPredicted RBP12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 RFC5P40937 340 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 TSTA3Q13630 321 aaPredicted RBP12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 RASA2Q15283 850 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 ERMARDQ5T6L9 678 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 FRA10AC1Q70Z53 315 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 TAS1R2Q8TE23 839 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 SPATA33Q96N06 139 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 TARS2Q9BW92 718 aaKnown RBP12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 ARHGAP26Q9UNA1 814 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 KRT16P08779 473 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 BAG6P46379 1132 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 SULT1E1P49888 294 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 TPI1P60174 286 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 FLOT2Q14254 428 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 PCNX4Q63HM2 1172 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 BAP1Q92560 729 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 SLC5A5Q92911 643 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 IFT43Q96FT9 208 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 CCT7Q99832 543 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 NINJ2Q9NZG7 142 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 PCDHA3Q9Y5H8 950 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 MAFGO15525 162 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 HSPA13P48723 471 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 OTUD4Q01804 1114 aaKnown RBP12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 TTLL4Q14679 1199 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 SLC10A5Q5PT55 438 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 SPOCD1Q6ZMY3 1216 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 KCNK18Q7Z418 384 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 GPRC5CQ9NQ84 441 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 ABCF3Q9NUQ8 709 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 TAGLN3Q9UI15 199 aa12.75□□□□□ -0.37
NPC1L1-204ENST00000546276 C3orf70A6NLC5 250 aaPredicted RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 SKAP2O75563 359 aaPredicted RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 ATXN3P54252 364 aaPredicted RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 MTMR9Q96QG7 549 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 PAPOLBQ9NRJ5 636 aaKnown RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 BTNL10A8MVZ5 291 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 RNF225M0QZC1 329 aaPredicted RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 PAX7P23759 505 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 IL17AQ16552 155 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms