RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	KRT4	P19013	534 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	KLRC2	P26717	231 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	ADSL	P30566	484 aa	Predicted RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	CHKA	P35790	457 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	FDFT1	P37268	417 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	NEK2	P51955	445 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	ESRRG	P62508	458 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	FOLH1	Q04609	750 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	KLF1	Q13351	362 aa	Predicted RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	SEPT6	Q14141	434 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF423	Q2M1K9	1284 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	FAM47A	Q5JRC9	791 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	GPATCH4	Q5T3I0	446 aa	Known RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	METTL21C	Q5VZV1	264 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	ACAD10	Q6JQN1	1059 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	RBM44	Q6ZP01	1051 aa	Known RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	RINL	Q6ZS11	566 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF804A	Q7Z570	1209 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	FBXO33	Q7Z6M2	555 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	CRLF3	Q8IUI8	442 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	WDR75	Q8IWA0	830 aa	Known RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	KBTBD2	Q8IY47	623 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	FAM71A	Q8IYT1	594 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	TTC13	Q8NBP0	860 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	RBM15B	Q8NDT2	890 aa	Known RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	HM13	Q8TCT9	377 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	SNRNP27	Q8WVK2	155 aa	Known RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	APOPT1	Q96IL0	206 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	CNDP2	Q96KP4	475 aa	Known RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	NUP85	Q9BW27	656 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	INO80B	Q9C086	356 aa	Predicted RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	KLC2	Q9H0B6	622 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	USP29	Q9HBJ7	922 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	SLCO1B3	Q9NPD5	702 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	C8orf4	Q9NR00	106 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	SEPT11	Q9NVA2	429 aa	Known RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	TMOD3	Q9NYL9	352 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	IGSF9	Q9P2J2	1179 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	RSL24D1	Q9UHA3	163 aa	Known RBP	10.67	□□□□□ -0.7
UBC-213	ENST00000546120	TBK1	Q9UHD2	729 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF180	Q9UJW8	692 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	VPS28	Q9UK41	221 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	PSMD13	Q9UNM6	376 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	LZTS1	Q9Y250	596 aa		10.67	□□□□□ -0.7
UBC-213	ENST00000546120	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.66	□□□□□ -0.7
UBC-213	ENST00000546120	MYH3	P11055	1940 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ASTN1	O14525	1302 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	CLUH	O75153	1309 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	C15orf38-AP3S2	A0A0A6YYH1	394 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	IQCA1L	A6NCM1	817 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120		A6NJR5	290 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	SOBP	A7XYQ1	873 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	GOLGA8T	H3BQL2	631 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.66	□□□□□ -0.7
UBC-213	ENST00000546120	CAPNS1	P04632	268 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ALDH2	P05091	517 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	TFAP2A	P05549	437 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ITGAV	P06756	1048 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	CD48	P09326	243 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	GOLGA8H	P0CJ92	632 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF23	P17027	643 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	CNTF	P26441	200 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	HMOX2	P30519	316 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	MAPK4	P31152	587 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	HK2	P52789	917 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	EMP3	P54852	163 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	CHRND	Q07001	517 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	BFSP1	Q12934	665 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	PPP2R5C	Q13362	524 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	SLC1A5	Q15758	541 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	BCL2A1	Q16548	175 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF829	Q3KNS6	432 aa	Predicted RBP	10.66	□□□□□ -0.7
UBC-213	ENST00000546120	FSCB	Q5H9T9	825 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	LIN9	Q5TKA1	542 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	IRAK1BP1	Q5VVH5	260 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	PGM2L1	Q6PCE3	622 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	GSTA5	Q7RTV2	222 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	HAUS6	Q7Z4H7	955 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ARPIN	Q7Z6K5	226 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF410	Q86VK4	478 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	SLF2	Q8IX21	1173 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	COLGALT2	Q8IYK4	626 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF276	Q8N554	614 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.66	□□□□□ -0.7
UBC-213	ENST00000546120	GDPD5	Q8WTR4	605 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	NMD3	Q96D46	503 aa	Known RBP	10.66	□□□□□ -0.7
UBC-213	ENST00000546120	ABHD8	Q96I13	439 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	NGLY1	Q96IV0	654 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	PANX3	Q96QZ0	392 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	TTC1	Q99614	292 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	CORO1B	Q9BR76	489 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	GPR88	Q9GZN0	384 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	EBF3	Q9H4W6	596 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	KCNK13	Q9HB14	408 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	PCDH9	Q9HC56	1237 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	MAGEE1	Q9HCI5	957 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	TUFT1	Q9NNX1	390 aa		10.66	□□□□□ -0.7
UBC-213	ENST00000546120	MLXIPL	Q9NP71	852 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms