RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, human

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-215	ENST00000546102	ALDH9A1	P49189	494 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	HK3	P52790	923 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	NKX6-1	P78426	367 aa	Predicted RBP	4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	ZNF200	P98182	395 aa	Predicted RBP	4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	FMO1	Q01740	532 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	MVK	Q03426	396 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	PPP3CA	Q08209	521 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	PRKG1	Q13976	671 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	PLS1	Q14651	629 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	KIR3DS1	Q14943	382 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	POSTN	Q15063	836 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	TAF5	Q15542	800 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	CNGA2	Q16280	664 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	TAF12	Q16514	161 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	MPEG1	Q2M385	716 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	SLC35G1	Q2M3R5	365 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	FKBP15	Q5T1M5	1219 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	INTS11	Q5TA45	600 aa	Known RBP	4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	FAM180B	Q6P0A1	224 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	HEATR3	Q7Z4Q2	680 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	RHOT1	Q8IXI2	618 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	CACNA2D3	Q8IZS8	1091 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	TSPYL6	Q8N831	410 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	RNF152	Q8N8N0	203 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	ATG16L2	Q8NAA4	619 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	ARRDC4	Q8NCT1	418 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	SEC14L1	Q92503	715 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	RPGR	Q92834	1020 aa	Known RBP	4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	ZNF566	Q969W8	418 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	MTFMT	Q96DP5	389 aa	Known RBP	4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	RMDN3	Q96TC7	470 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	FOXB1	Q99853	325 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	PTPN18	Q99952	460 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	C7orf25	Q9BPX7	421 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	RXFP1	Q9HBX9	757 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	VPS45	Q9NRW7	570 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	GJB4	Q9NTQ9	266 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	BTBD7	Q9P203	1132 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	LRFN1	Q9P244	771 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	PDP2	Q9P2J9	529 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	CPNE7	Q9UBL6	633 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	CPA4	Q9UI42	421 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	SCOC	Q9UIL1	159 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	ACSL6	Q9UKU0	697 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	DENND2A	Q9ULE3	1009 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	CRYL1	Q9Y2S2	319 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	PCDHB6	Q9Y5E3	794 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	PCDHA3	Q9Y5H8	950 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	PMF1-BGLAP	U3KQ54	211 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	DOT1L	Q8TEK3	1739 aa		4.04	□□□□□ -1.76
CUL3-215	ENST00000546102	GLI3	P10071	1580 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	ERVV-2	B6SEH9	535 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	CYP27B1	O15528	508 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	SGSM2	O43147	1006 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	MBD4	O95243	580 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	TH	P07101	528 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	VEGFA	P15692	232 aa	Predicted RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	FAH	P16930	419 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	CCT4	P50991	539 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	SUMO3	P55854	103 aa	Predicted RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	KRTAP10-2	P60368	255 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	EIF4A1	P60842	406 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	MGAT2	Q10469	447 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	GALNT1	Q10472	559 aa	Predicted RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	GRM1	Q13255	1194 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	PFKFB4	Q16877	469 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	ARL13B	Q3SXY8	428 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	CCDC93	Q567U6	631 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	NT5DC1	Q5TFE4	455 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	MEX3C	Q5U5Q3	659 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	ZNF790	Q6PG37	636 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	C1orf122	Q6ZSJ8	110 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	MILR1	Q7Z6M3	343 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	CABP7	Q86V35	215 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	DCP2	Q8IU60	420 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	TXLNB	Q8N3L3	684 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	TMEM57	Q8N5G2	664 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	MSL3	Q8N5Y2	521 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	CELF5	Q8N6W0	485 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	CDYL2	Q8N8U2	506 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	GPATCH11	Q8N954	259 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	C3orf20	Q8ND61	904 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	OR10H5	Q8NGA6	315 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	C18orf8	Q96DM3	657 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	ZC3H10	Q96K80	434 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	CLPTM1L	Q96KA5	538 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	NOL10	Q9BSC4	688 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	SORBS1	Q9BX66	1292 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	TMEM120A	Q9BXJ8	343 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	AP5M1	Q9H0R1	490 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	MAGEH1	Q9H213	219 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	RWDD1	Q9H446	243 aa	Predicted RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	RBM12	Q9NTZ6	932 aa	Known RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	PNPO	Q9NVS9	261 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	MIS18A	Q9NYP9	233 aa		4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	IFT80	Q9P2H3	777 aa	Predicted RBP	4.03	□□□□□ -1.76
CUL3-215	ENST00000546102	ARHGAP28	Q9P2N2	729 aa		4.03	□□□□□ -1.76

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