RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 CD19P15391 556 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 TYMPP19971 482 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 FECHP22830 423 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 GNA15P30679 374 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 HNRNPH3P31942 346 aaKnown RBP18.14■□□□□ 0.49
CADM1-220ENST00000546000 BMP8BP34820 402 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 GNL1P36915 607 aaPredicted RBP18.14■□□□□ 0.49
CADM1-220ENST00000546000 CCZ1BP86790 482 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 CCZ1P86791 482 aaPredicted RBP18.14■□□□□ 0.49
CADM1-220ENST00000546000 KLHL30Q0D2K2 578 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.14■□□□□ 0.49
CADM1-220ENST00000546000 DPH6Q7L8W6 267 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 ZNF571Q7Z3V5 609 aaPredicted RBP18.14■□□□□ 0.49
CADM1-220ENST00000546000 METTL23Q86XA0 190 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 C12orf29Q8N999 325 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 TMEM176AQ96HP8 235 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 HAUS4Q9H6D7 363 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 PCDHB12Q9Y5F1 795 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 PCDHA11Q9Y5I1 949 aa18.14■□□□□ 0.49
CADM1-220ENST00000546000 CHD9Q3L8U1 2897 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 C2CD2LO14523 706 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 THAP12O43422 761 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 TRAPPC3O43617 180 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 MMEP08473 750 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 CCDC130P13994 396 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 CYP11B1P15538 503 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 CHRNB2P17787 502 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 DNAJB2P25686 324 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 EIF4A3P38919 411 aaKnown RBP18.13■□□□□ 0.49
CADM1-220ENST00000546000 TAP1Q03518 808 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 YWHAHQ04917 246 aaPredicted RBP18.13■□□□□ 0.49
CADM1-220ENST00000546000 PTK2Q05397 1052 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 RSPO2Q6UXX9 243 aaPredicted RBP18.13■□□□□ 0.49
CADM1-220ENST00000546000 DNAAF5Q86Y56 855 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 PALB2Q86YC2 1186 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 PASD1Q8IV76 773 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 LRRC8AQ8IWT6 810 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 TMEM86AQ8N2M4 240 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 LNX1Q8TBB1 728 aaPredicted RBP18.13■□□□□ 0.49
CADM1-220ENST00000546000 DDX1Q92499 740 aaKnown RBP18.13■□□□□ 0.49
CADM1-220ENST00000546000 SYN2Q92777 582 aaPredicted RBP18.13■□□□□ 0.49
CADM1-220ENST00000546000 SYT15Q9BQS2 421 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 SYT11Q9BT88 431 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 NT5C1AQ9BXI3 368 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 CRTAC1Q9NQ79 661 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 AAASQ9NRG9 546 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 TMLHEQ9NVH6 421 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 PCDHGC5Q9Y5F6 944 aa18.13■□□□□ 0.49
CADM1-220ENST00000546000 SZT2Q5T011 3432 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 SYN3O14994 580 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 ADAM12O43184 909 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 SERPING1P05155 500 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 RPL17P18621 184 aaKnown RBP18.12■□□□□ 0.49
CADM1-220ENST00000546000 PAX3P23760 479 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 PPM1AP35813 382 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 BMPR1AP36894 532 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 PRKCIP41743 596 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 PDE6CP51160 858 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 MDH1BQ5I0G3 518 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 RAD9BQ6WBX8 426 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 RIN2Q8WYP3 895 aaPredicted RBP18.12■□□□□ 0.49
CADM1-220ENST00000546000 HEXIM2Q96MH2 286 aaKnown RBP18.12■□□□□ 0.49
CADM1-220ENST00000546000 BAG1Q99933 345 aaPredicted RBP18.12■□□□□ 0.49
CADM1-220ENST00000546000 TTPALQ9BTX7 342 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 RHOBTB2Q9BYZ6 727 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 NUCKS1Q9H1E3 243 aaKnown RBP18.12■□□□□ 0.49
CADM1-220ENST00000546000 ALG13Q9NP73 1137 aaKnown RBP18.12■□□□□ 0.49
CADM1-220ENST00000546000 ZNHIT6Q9NWK9 470 aaKnown RBP18.12■□□□□ 0.49
CADM1-220ENST00000546000 CHD7Q9P2D1 2997 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 DSEQ9UL01 958 aa18.12■□□□□ 0.49
CADM1-220ENST00000546000 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.11■□□□□ 0.49
CADM1-220ENST00000546000 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.11■□□□□ 0.49
CADM1-220ENST00000546000 MYBPHLA2RUH7 354 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 CLDN5O00501 218 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 SOD2P04179 222 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 DNAJB1P25685 340 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 LHX1P48742 406 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 FMO1Q01740 532 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 ELAVL2Q12926 359 aaKnown RBP18.11■□□□□ 0.49
CADM1-220ENST00000546000 MRPL58Q14197 206 aaKnown RBP18.11■□□□□ 0.49
CADM1-220ENST00000546000 TSR1Q2NL82 804 aaKnown RBP18.11■□□□□ 0.49
CADM1-220ENST00000546000 GOLGA7BQ2TAP0 167 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 CTXN3Q4LDR2 81 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 INTS6LQ5JSJ4 861 aaKnown RBP18.11■□□□□ 0.49
CADM1-220ENST00000546000 DENND1BQ6P3S1 775 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 DDX53Q86TM3 631 aaKnown RBP18.11■□□□□ 0.49
CADM1-220ENST00000546000 UNC93AQ86WB7 457 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 GLYCTKQ8IVS8 523 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 VPS52Q8N1B4 723 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 B3GALNT2Q8NCR0 500 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 PCDHB18PQ96TA0 734 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 PKMYT1Q99640 499 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 SPTLC3Q9NUV7 552 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 SEPT11Q9NVA2 429 aaKnown RBP18.11■□□□□ 0.49
CADM1-220ENST00000546000 COL4A4P53420 1690 aaPredicted RBP18.11■□□□□ 0.49
CADM1-220ENST00000546000 LAMA3Q16787 3333 aa18.11■□□□□ 0.49
CADM1-220ENST00000546000 EPOPA6NHQ4 379 aa18.1■□□□□ 0.49
CADM1-220ENST00000546000 DDX3XO00571 662 aaKnown RBP eCLIP18.1■□□□□ 0.49
CADM1-220ENST00000546000 PAEPP09466 180 aa18.1■□□□□ 0.49
CADM1-220ENST00000546000 PTPN1P18031 435 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms