RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 NUP58Q9BVL2 599 aa13.98□□□□□ -0.17
DDX11-227ENST00000544652 EDEM3Q9BZQ6 932 aa13.98□□□□□ -0.17
DDX11-227ENST00000544652 GPR88Q9GZN0 384 aa13.98□□□□□ -0.17
DDX11-227ENST00000544652 RXFP1Q9HBX9 757 aa13.98□□□□□ -0.17
DDX11-227ENST00000544652 NGRNQ9NPE2 291 aaKnown RBP13.98□□□□□ -0.17
DDX11-227ENST00000544652 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.98□□□□□ -0.17
DDX11-227ENST00000544652 MRPL17Q9NRX2 175 aaKnown RBP13.98□□□□□ -0.17
DDX11-227ENST00000544652 CISHQ9NSE2 258 aa13.98□□□□□ -0.17
DDX11-227ENST00000544652 FAM207AQ9NSI2 230 aaPredicted RBP13.98□□□□□ -0.17
DDX11-227ENST00000544652 DDX43Q9NXZ2 648 aaKnown RBP13.98□□□□□ -0.17
DDX11-227ENST00000544652 CEP72Q9P209 647 aa13.98□□□□□ -0.17
DDX11-227ENST00000544652 FNIP2Q9P278 1114 aa13.98□□□□□ -0.17
DDX11-227ENST00000544652 BARX2Q9UMQ3 279 aaPredicted RBP13.98□□□□□ -0.17
DDX11-227ENST00000544652 C2orf16Q68DN1 1984 aa13.98□□□□□ -0.17
DDX11-227ENST00000544652 CHD9Q3L8U1 2897 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 MYO16Q9Y6X6 1858 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 CLSTN1O94985 981 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 LMO2P25791 158 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 GNL1P36915 607 aaPredicted RBP13.97□□□□□ -0.17
DDX11-227ENST00000544652 MLLT3P42568 568 aaPredicted RBP13.97□□□□□ -0.17
DDX11-227ENST00000544652 JAM2P57087 298 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 CREMQ03060 361 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 SMC1AQ14683 1233 aaKnown RBP13.97□□□□□ -0.17
DDX11-227ENST00000544652 BMS1Q14692 1282 aaKnown RBP13.97□□□□□ -0.17
DDX11-227ENST00000544652 PSMD5Q16401 504 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 HABP4Q5JVS0 413 aaKnown RBP13.97□□□□□ -0.17
DDX11-227ENST00000544652 SLC8B1Q6J4K2 584 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 ZNF280DQ6N043 979 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 KIAA1841Q6NSI8 718 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 PRSS55Q6UWB4 352 aaPredicted RBP13.97□□□□□ -0.17
DDX11-227ENST00000544652 TMC7Q7Z402 723 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 CRYBG2Q8N1P7 616 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 THEM5Q8N1Q8 247 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 MRPL43Q8N983 215 aaKnown RBP13.97□□□□□ -0.17
DDX11-227ENST00000544652 OR6B3Q8NGW1 331 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 RIN2Q8WYP3 895 aaPredicted RBP13.97□□□□□ -0.17
DDX11-227ENST00000544652 PCMTD1Q96MG8 357 aaPredicted RBP13.97□□□□□ -0.17
DDX11-227ENST00000544652 PKMYT1Q99640 499 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 STK33Q9BYT3 514 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 TRIOBPQ9H2D6 2365 aa13.97□□□□□ -0.17
DDX11-227ENST00000544652 A0A1W2PQJ5 194 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 C2orf71A6NGG8 1288 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 OR6C75A6NL08 312 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 RFXAPO00287 272 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 HCRTO43612 131 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 CXCL14O95715 111 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 TRIM21P19474 475 aaKnown RBP13.96□□□□□ -0.17
DDX11-227ENST00000544652 POU3F3P20264 500 aaPredicted RBP13.96□□□□□ -0.17
DDX11-227ENST00000544652 PCSK1P29120 753 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 IRS1P35568 1242 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 ZNF132P52740 706 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 NDST1P52848 882 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 POLR2FP61218 127 aaKnown RBP13.96□□□□□ -0.17
DDX11-227ENST00000544652 DRAP1Q14919 205 aaPredicted RBP13.96□□□□□ -0.17
DDX11-227ENST00000544652 CTXN3Q4LDR2 81 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 ZNF697Q5TEC3 545 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 SPECC1LQ69YQ0 1117 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 RSPO2Q6UXX9 243 aaPredicted RBP13.96□□□□□ -0.17
DDX11-227ENST00000544652 OR10T2Q8NGX3 314 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 AUTS2Q8WXX7 1259 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 BAP1Q92560 729 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 MRPL38Q96DV4 380 aaKnown RBP13.96□□□□□ -0.17
DDX11-227ENST00000544652 TWNKQ96RR1 684 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 CLSTN3Q9BQT9 956 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 ZCWPW1Q9H0M4 648 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 SNX25Q9H3E2 840 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 ENTPD7Q9NQZ7 604 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 LMCD1Q9NZU5 365 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 HMGXB4Q9UGU5 601 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 CDH9Q9ULB4 789 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 MYO6Q9UM54 1294 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■■■■□ 24.7
DDX11-227ENST00000544652 CHD7Q9P2D1 2997 aa13.96□□□□□ -0.17
DDX11-227ENST00000544652 A8MXQ7 604 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 F8VZ95 297 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
DDX11-227ENST00000544652 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
DDX11-227ENST00000544652 C2CD2LO14523 706 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 C1RP00736 705 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 CNPP09543 421 aaKnown RBP13.95□□□□□ -0.18
DDX11-227ENST00000544652 CD58P19256 250 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 CDC25BP30305 580 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 MRE11P49959 708 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 RAD23BP54727 409 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 TBX2Q13207 712 aaPredicted RBP13.95□□□□□ -0.18
DDX11-227ENST00000544652 GRIN2CQ14957 1233 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 PTPROQ16827 1216 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 ARHGAP44Q17R89 818 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 INTS6LQ5JSJ4 861 aaKnown RBP13.95□□□□□ -0.18
DDX11-227ENST00000544652 PLPP4Q5VZY2 271 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 FAM171BQ6P995 826 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 FAM71AQ8IYT1 594 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 TMEM176AQ96HP8 235 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 KLHL5Q96PQ7 755 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 TMEM209Q96SK2 561 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 NT5C1AQ9BXI3 368 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 ELOVL4Q9GZR5 314 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 DPEP3Q9H4B8 488 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 NLRC4Q9NPP4 1024 aa13.95□□□□□ -0.18
DDX11-227ENST00000544652 CAPN11Q9UMQ6 739 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms