RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 HDAC7Q8WUI4 952 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 KRT12Q99456 494 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 TSEN34Q9BSV6 310 aaKnown RBP13.52□□□□□ -0.25
PAAF1-214ENST00000544552 TRAIPQ9BWF2 469 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 GDF3Q9NR23 364 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
PAAF1-214ENST00000544552 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 WDR35Q9P2L0 1181 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 TUBGCP4Q9UGJ1 667 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 PARP2Q9UGN5 583 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 IP6K2Q9UHH9 426 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 ST3GAL5Q9UNP4 418 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.52□□□□□ -0.25
PAAF1-214ENST00000544552 PTCH2Q9Y6C5 1203 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 SCN1AP35498 2009 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 O00370 1275 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 SART1O43290 800 aaKnown RBP13.51□□□□□ -0.25
PAAF1-214ENST00000544552 LRPAP1P30533 357 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 SSTR3P32745 418 aaPredicted RBP13.51□□□□□ -0.25
PAAF1-214ENST00000544552 NDST1P52848 882 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 PTK7Q13308 1070 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 ZNF268Q14587 947 aaPredicted RBP13.51□□□□□ -0.25
PAAF1-214ENST00000544552 PTGISQ16647 500 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 C2CD6Q53TS8 623 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 FAM26DQ5JW98 314 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 FBXO47Q5MNV8 452 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 PPP1R15BQ5SWA1 713 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 SEL1L2Q5TEA6 688 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 LCLAT1Q6UWP7 414 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 HDXQ7Z353 690 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 LIMS2Q7Z4I7 341 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 HACE1Q8IYU2 909 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 C3orf20Q8ND61 904 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 CCDC26Q8TAB7 109 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.51□□□□□ -0.25
PAAF1-214ENST00000544552 WNT8BQ93098 351 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 C18orf25Q96B23 403 aaPredicted RBP13.51□□□□□ -0.25
PAAF1-214ENST00000544552 HEXIM2Q96MH2 286 aaKnown RBP13.51□□□□□ -0.25
PAAF1-214ENST00000544552 ZNF560Q96MR9 790 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 PRDM10Q9NQV6 1147 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 HMGXB4Q9UGU5 601 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 SQORQ9Y6N5 450 aa13.51□□□□□ -0.25
PAAF1-214ENST00000544552 GOLGA6L10A0A0M3HER8 536 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 MOXD2PA6NHM9 499 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 BHMG1C9JSJ3 638 aaPredicted RBP13.5□□□□□ -0.25
PAAF1-214ENST00000544552 PSTPIP1O43586 416 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 CAND2O75155 1236 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 CAPN15O75808 1086 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 PYGMP11217 842 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 GPD2P43304 727 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 GABRB2P47870 512 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 MARCKSL1P49006 195 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 ITGA7Q13683 1181 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 GLRA4Q5JXX5 417 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 DPH6Q7L8W6 267 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 MAATS1Q7Z4T9 603 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 MRPL10Q7Z7H8 261 aaKnown RBP13.5□□□□□ -0.25
PAAF1-214ENST00000544552 APOL6Q9BWW8 343 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 AP1M1Q9BXS5 423 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 TRIM7Q9C029 511 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 FAM105AQ9NUU6 356 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 SNX9Q9Y5X1 595 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 CEP350Q5VT06 3117 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 SIGLEC16A6NMB1 481 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 KPNA7A9QM74 516 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 PPEF2O14830 753 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 ZNF623O75123 536 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 MICAL2O94851 1124 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 GLI1P08151 1106 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 ACLYP53396 1101 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 SLC7A5Q01650 507 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 ZNF211Q13398 564 aaPredicted RBP13.5□□□□□ -0.25
PAAF1-214ENST00000544552 PIGHQ14442 188 aaPredicted RBP13.5□□□□□ -0.25
PAAF1-214ENST00000544552 SOWAHAQ2M3V2 549 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 PTPN20Q4JDL3 420 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 LRRC38Q5VT99 294 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 LLGL2Q6P1M3 1020 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 DNAJC24Q6P3W2 148 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 FBXO46Q6PJ61 603 aaPredicted RBP13.5□□□□□ -0.25
PAAF1-214ENST00000544552 RHOT1Q8IXI2 618 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 KLHL7Q8IXQ5 586 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 NIPA2Q8N8Q9 360 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 ARRDC4Q8NCT1 418 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 FNIP1Q8TF40 1166 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 C18orf8Q96DM3 657 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 PPP1R10Q96QC0 940 aaKnown RBP13.5□□□□□ -0.25
PAAF1-214ENST00000544552 DNAI2Q9GZS0 605 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 MIS12Q9H081 205 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 ERVK-5Q9HDB9 667 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.5□□□□□ -0.25
PAAF1-214ENST00000544552 KLK14Q9P0G3 267 aa13.5□□□□□ -0.25
PAAF1-214ENST00000544552 FSCN2O14926 492 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 RAD51CO43502 376 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 ZMYND10O75800 440 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 SASH3O75995 380 aa13.49□□□□□ -0.25
PAAF1-214ENST00000544552 HEXIM1O94992 359 aaKnown RBP13.49□□□□□ -0.25
PAAF1-214ENST00000544552 ITGA4P13612 1032 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms