RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 ASAP2O43150 1006 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 IL18RAPO95256 599 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 ATF7P17544 494 aaPredicted RBP19.04■□□□□ 0.64
VIM-209ENST00000544301 RAP1GAPP47736 663 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 COPS2P61201 443 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 CHADLQ6NUI6 762 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 CDCA5Q96FF9 252 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 MROH8Q9H579 483 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 INTS9Q9NV88 658 aaKnown RBP19.04■□□□□ 0.64
VIM-209ENST00000544301 SIX4Q9UIU6 781 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 DNPEPQ9ULA0 475 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 C22orf31O95567 290 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 PTPN7P35236 360 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 LACTBP83111 547 aaPredicted RBP19.04■□□□□ 0.64
VIM-209ENST00000544301 TTLL12Q14166 644 aaPredicted RBP19.04■□□□□ 0.64
VIM-209ENST00000544301 TTLL4Q14679 1199 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 RNF187Q5TA31 235 aaPredicted RBP19.04■□□□□ 0.64
VIM-209ENST00000544301 HIBCHQ6NVY1 386 aaPredicted RBP19.04■□□□□ 0.64
VIM-209ENST00000544301 DRICH1Q6PGQ1 229 aaPredicted RBP19.04■□□□□ 0.64
VIM-209ENST00000544301 PACS2Q86VP3 889 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 MGAMO43451 1857 aa19.04■□□□□ 0.64
VIM-209ENST00000544301 GPR25O00155 361 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 TCEA3O75764 348 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 KRT19P08727 400 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 CNGA2Q16280 664 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 P3H1Q32P28 736 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 TTC31Q49AM3 519 aaPredicted RBP19.03■□□□□ 0.64
VIM-209ENST00000544301 PTPN20Q4JDL3 420 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 EAPPQ56P03 285 aaPredicted RBP19.03■□□□□ 0.64
VIM-209ENST00000544301 GKAP1Q5VSY0 366 aaPredicted RBP19.03■□□□□ 0.64
VIM-209ENST00000544301 RELL1Q8IUW5 271 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 CACNA2D3Q8IZS8 1091 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 ACSF2Q96CM8 615 aaPredicted RBP19.03■□□□□ 0.64
VIM-209ENST00000544301 OPTNQ96CV9 577 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 NFKBIZQ9BYH8 718 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 BCO2Q9BYV7 579 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 FHDC1Q9C0D6 1143 aaPredicted RBP19.03■□□□□ 0.64
VIM-209ENST00000544301 LHX5Q9H2C1 402 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 CCDC134Q9H6E4 229 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 DDX56Q9NY93 547 aaKnown RBP19.03■□□□□ 0.64
VIM-209ENST00000544301 CYTH4Q9UIA0 394 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 hCG_1818297A0A087WSY0 165 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 NFICP08651 508 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 CD19P15391 556 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 FASTKD5Q7L8L6 764 aaKnown RBP19.03■□□□□ 0.64
VIM-209ENST00000544301 TMEM130Q8N3G9 435 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 C1orf127Q8N9H9 656 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 GLIS1Q8NBF1 620 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 IFT122Q9HBG6 1241 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 PRMT7Q9NVM4 692 aaPredicted RBP19.03■□□□□ 0.64
VIM-209ENST00000544301 ERAP1Q9NZ08 941 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 STRIP2Q9ULQ0 834 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 ZNF148Q9UQR1 794 aa19.03■□□□□ 0.64
VIM-209ENST00000544301 LACTBL1A8MY62 500 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 CDKN2BP42772 138 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 RAD23BP54727 409 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 CDH8P55286 799 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 IGBP1P78318 339 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 WDR72Q3MJ13 1102 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 TFDP3Q5H9I0 405 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 ZNF667Q5HYK9 610 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 ZCCHC9Q8N567 271 aaKnown RBP19.02■□□□□ 0.64
VIM-209ENST00000544301 ALLCQ8N6M5 410 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 CCHCR1Q8TD31 782 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 ARHGEF2Q92974 986 aaKnown RBP19.02■□□□□ 0.64
VIM-209ENST00000544301 CABS1Q96KC9 395 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 PRMT1Q99873 361 aaKnown RBP19.02■□□□□ 0.64
VIM-209ENST00000544301 SDCBP2Q9H190 292 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 RNF181Q9P0P0 153 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 TJP2Q9UDY2 1190 aa19.02■□□□□ 0.64
VIM-209ENST00000544301 LOC102724159A0A0B4J2E5 919 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 GOLGA8SH3BPF8 625 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 MED7O43513 233 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 FSBPO95073 299 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 STAG3L1P0CL83 205 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 POLR2BP30876 1174 aaKnown RBP19.01■□□□□ 0.63
VIM-209ENST00000544301 RFC1P35251 1148 aaPredicted RBP19.01■□□□□ 0.63
VIM-209ENST00000544301 PWP2Q15269 919 aaKnown RBP19.01■□□□□ 0.63
VIM-209ENST00000544301 ZNF484Q5JVG2 852 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 FOXP3Q9BZS1 431 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 CTNNAL1Q9UBT7 734 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 DRG1Q9Y295 367 aaKnown RBP19.01■□□□□ 0.63
VIM-209ENST00000544301 EVPLQ92817 2033 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 LRRD1A4D1F6 860 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 ASB14A6NK59 587 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 SIGLEC16A6NMB1 481 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 CSDE1O75534 798 aaKnown RBP19.01■□□□□ 0.63
VIM-209ENST00000544301 ZSCAN5DPP0CG00 497 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 INSRRP14616 1297 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 ATP5DP30049 168 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 PHKA2P46019 1235 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 ARHGAP1Q07960 439 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 AMHR2Q16671 573 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 FAM187BQ17R55 369 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 JADE1Q6IE81 842 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 JOSD2Q8TAC2 188 aa19.01■□□□□ 0.63
VIM-209ENST00000544301 C3orf70A6NLC5 250 aaPredicted RBP19■□□□□ 0.63
VIM-209ENST00000544301 DNALI1O14645 258 aaPredicted RBP19■□□□□ 0.63
VIM-209ENST00000544301 KRT3P12035 628 aa19■□□□□ 0.63
VIM-209ENST00000544301 PSMA2P25787 234 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms