RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 SNRNP48Q6IEG0 339 aaKnown RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 LRRC8DQ7L1W4 858 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF438Q7Z4V0 828 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 WDR36Q8NI36 951 aaKnown RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 XPO6Q96QU8 1125 aaKnown RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 WWOXQ9NZC7 414 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 AGO2Q9UKV8 859 aaKnown RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF839A8K0R7 811 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 SPAG6O75602 509 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 HMBSP08397 361 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 WEE2P0C1S8 567 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 CYP51A1Q16850 503 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 SENP7Q9BQF6 1050 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 THUMPD3Q9BV44 507 aaKnown RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 STN1Q9H668 368 aaKnown RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 GALNT8Q9NY28 637 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 DLGAP2Q9P1A6 1054 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 E2F8A0AVK6 867 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 DDHD2O94830 711 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 ATP1A1P05023 1023 aaKnown RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 POLBP06746 335 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 CYP2C19P33261 490 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 GUCY1A2P33402 732 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 QARSP47897 775 aaKnown RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 SGSM1Q2NKQ1 1148 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 C4orf33Q8N1A6 199 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 STKLD1Q8NE28 680 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 RNFT2Q96EX2 444 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 RBM15Q96T37 977 aaKnown RBP eCLIP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 CATSPERBQ9H7T0 1116 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 COPS7BQ9H9Q2 264 aaPredicted RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 KLHL3Q9UH77 587 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 AMACRQ9UHK6 382 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 GRID1Q9ULK0 1009 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 NEU2Q9Y3R4 380 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 ZHX2Q9Y6X8 837 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 RPAP1Q9BWH6 1393 aaPredicted RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 RFX3P48380 749 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 ORC2Q13416 577 aaPredicted RBP10.82□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF618Q5T7W0 954 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 AGBL2Q5U5Z8 902 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 TRIQKQ629K1 86 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 OTOAQ7RTW8 1153 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
PCDH9-204ENST00000544246 SEC16BQ96JE7 1060 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 PUS7LQ9H0K6 701 aaKnown RBP10.82□□□□□ -0.68
PCDH9-204ENST00000544246 MANSC1Q9H8J5 431 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 VTA1Q9NP79 307 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 PNMA8BQ9ULN7 279 aaPredicted RBP10.82□□□□□ -0.68
PCDH9-204ENST00000544246 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 PLA2R1Q13018 1463 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 CNOT3O75175 753 aaKnown RBP10.82□□□□□ -0.68
PCDH9-204ENST00000544246 CHRM3P20309 590 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 SCP2P22307 547 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 YWHAQP27348 245 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 LIFRP42702 1097 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 PSMC5P62195 406 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 NKX1-1Q15270 411 aaPredicted RBP10.82□□□□□ -0.68
PCDH9-204ENST00000544246 C12orf60Q5U649 245 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 IKBIPQ70UQ0 350 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 TRPM8Q7Z2W7 1104 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 CAMKK2Q96RR4 588 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 CXorf56Q9H5V9 222 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 DBR1Q9UK59 544 aaKnown RBP10.82□□□□□ -0.68
PCDH9-204ENST00000544246 EMSYQ7Z589 1322 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 RNF17Q9BXT8 1623 aaKnown RBP10.82□□□□□ -0.68
PCDH9-204ENST00000544246 SMIM31A0A1B0GVY4 71 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.82□□□□□ -0.68
PCDH9-204ENST00000544246 ASNSP08243 561 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 NFICP08651 508 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF23P17027 643 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 PTPN7P35236 360 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 SNX30Q5VWJ9 437 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 FBXW10Q5XX13 1052 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 KRT74Q7RTS7 529 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 BNIPLQ7Z465 357 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 CYFIP2Q96F07 1278 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 GPR63Q9BZJ6 419 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 RAB6BQ9NRW1 208 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 SMARCAL1Q9NZC9 954 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 AATKQ6ZMQ8 1374 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 USP17L5A8MUK1 530 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 SLC7A14Q8TBB6 771 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 CDH16O75309 829 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 COPAP53621 1224 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 NPEPPSP55786 919 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 MMRN1Q13201 1228 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 ARID5BQ14865 1188 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 CHI3L2Q15782 390 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 INAQ16352 499 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 RGS18Q9NS28 235 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 PIM2Q9P1W9 311 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 WDR35Q9P2L0 1181 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 CHMP2BQ9UQN3 213 aa10.82□□□□□ -0.68
PCDH9-204ENST00000544246 S100A9P06702 114 aaKnown RBP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 SNRPAP09012 282 aaKnown RBP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 NUDT2P50583 147 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 TWF1Q12792 350 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 C1DQ13901 141 aaKnown RBP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 LRRC49Q8IUZ0 686 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms