RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ARGLU1Q9NWB6 273 aaPredicted RBP21.04■□□□□ 0.96
COPS7A-218ENST00000543939 TMEM59LQ9UK28 342 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 PHF24Q9UPV7 400 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 DNAH12Q6ZR08 3092 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 A0A0U1RQG5 324 aaPredicted RBP21.04■□□□□ 0.96
COPS7A-218ENST00000543939 KPNA7A9QM74 516 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 PGRMC1O00264 195 aaKnown RBP21.04■□□□□ 0.96
COPS7A-218ENST00000543939 SPTLC1O15269 473 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 MICAL2O94851 1124 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 TAF6P49848 677 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 PEX5P50542 639 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 SOWAHAQ2M3V2 549 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 SGO2Q562F6 1265 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 UBL4BQ8N7F7 174 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 CYTH4Q9UIA0 394 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 GIT1Q9Y2X7 761 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 NME7Q9Y5B8 376 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 TARSL2A2RTX5 802 aaKnown RBP21.03■□□□□ 0.96
COPS7A-218ENST00000543939 MYO1FO00160 1098 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 SPOPO43791 374 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 TUBBP07437 444 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 CKBP12277 381 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 CTNNA1P35221 906 aaKnown RBP21.03■□□□□ 0.96
COPS7A-218ENST00000543939 MLH1P40692 756 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 MARCKSL1P49006 195 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 RAB27AP51159 221 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 SV2CQ496J9 727 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 TRAF7Q6Q0C0 670 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 AGMOQ6ZNB7 445 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 LIMS2Q7Z4I7 341 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 UNC93AQ86WB7 457 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 FEZF2Q8TBJ5 459 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 SH3TC2Q8TF17 1288 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 LPPQ93052 612 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 GAD1Q99259 594 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 SLC38A7Q9NVC3 462 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 RNF216Q9NWF9 866 aaPredicted RBP21.03■□□□□ 0.96
COPS7A-218ENST00000543939 PCDHA3Q9Y5H8 950 aa21.03■□□□□ 0.96
COPS7A-218ENST00000543939 CCDC66A2RUB6 948 aa21.02■□□□□ 0.96
COPS7A-218ENST00000543939 SLC1A1P43005 524 aa21.02■□□□□ 0.96
COPS7A-218ENST00000543939 PTPN20Q4JDL3 420 aa21.02■□□□□ 0.96
COPS7A-218ENST00000543939 LCLAT1Q6UWP7 414 aa21.02■□□□□ 0.96
COPS7A-218ENST00000543939 ARVCFO00192 962 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 PROSCO94903 275 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 BRD3Q15059 726 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 STILQ15468 1287 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 WDR93Q6P2C0 686 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 MTERF4Q7Z6M4 381 aaKnown RBP21.01■□□□□ 0.95
COPS7A-218ENST00000543939 KBTBD7Q8WVZ9 684 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 RNPC3Q96LT9 517 aaKnown RBP21.01■□□□□ 0.95
COPS7A-218ENST00000543939 UNC93B1Q9H1C4 597 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 MIOSQ9NXC5 875 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 STRIP2Q9ULQ0 834 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 A0A0U1RQF3 1178 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 CCDC151A5D8V7 595 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 ARL5CA6NH57 179 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 KBTBD13C9JR72 458 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 M0QYV0 167 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 GPD2P43304 727 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 LILRA4P59901 499 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 PPP1R15BQ5SWA1 713 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 DNAJC24Q6P3W2 148 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 ADAM2Q99965 735 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 LRRC1Q9BTT6 524 aa21.01■□□□□ 0.95
COPS7A-218ENST00000543939 TMEM191CA6NGB0 347 aa21■□□□□ 0.95
COPS7A-218ENST00000543939 GJB6O95452 261 aa21■□□□□ 0.95
COPS7A-218ENST00000543939 THP07101 528 aa21■□□□□ 0.95
COPS7A-218ENST00000543939 AFF1P51825 1210 aaKnown RBP21■□□□□ 0.95
COPS7A-218ENST00000543939 GSCP56915 257 aaPredicted RBP21■□□□□ 0.95
COPS7A-218ENST00000543939 VSNL1P62760 191 aa21■□□□□ 0.95
COPS7A-218ENST00000543939 ZNF211Q13398 564 aaPredicted RBP21■□□□□ 0.95
COPS7A-218ENST00000543939 CYP4A22Q5TCH4 519 aa21■□□□□ 0.95
COPS7A-218ENST00000543939 CCDC70Q6NSX1 233 aa21■□□□□ 0.95
COPS7A-218ENST00000543939 ACOT1Q86TX2 421 aa21■□□□□ 0.95
COPS7A-218ENST00000543939 C3orf20Q8ND61 904 aa21■□□□□ 0.95
COPS7A-218ENST00000543939 OR6B3Q8NGW1 331 aa21■□□□□ 0.95
COPS7A-218ENST00000543939 TSPYL2Q9H2G4 693 aaPredicted RBP21■□□□□ 0.95
COPS7A-218ENST00000543939 GTF3C5Q9Y5Q8 519 aaPredicted RBP21■□□□□ 0.95
COPS7A-218ENST00000543939 TDRD15B5MCY1 1934 aaKnown RBP21■□□□□ 0.95
COPS7A-218ENST00000543939 FGFR1P11362 822 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 MAN1A1P33908 653 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 RPL7AP62424 266 aaKnown RBP20.99■□□□□ 0.95
COPS7A-218ENST00000543939 TAP1Q03518 808 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 GLE1Q53GS7 698 aaKnown RBP20.99■□□□□ 0.95
COPS7A-218ENST00000543939 C12orf29Q8N999 325 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 APPL2Q8NEU8 664 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 C18orf8Q96DM3 657 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 CPXM1Q96SM3 734 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 TJP2Q9UDY2 1190 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 TSPAN16Q9UKR8 245 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 L1RE1Q9UN81 338 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 PTPN22Q9Y2R2 807 aa20.99■□□□□ 0.95
COPS7A-218ENST00000543939 FGGP02679 453 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 GABRB2P47870 512 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 CDK7P50613 346 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 PDCLQ13371 301 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 MBTPS1Q14703 1052 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 CLUL1Q15846 466 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 DPH6Q7L8W6 267 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 CRYBG2Q8N1P7 616 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms