RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ATP8A1Q9Y2Q0 1164 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 TRPM7Q96QT4 1865 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 CPT1AP50416 773 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 YARSP54577 528 aaKnown RBP18.05■□□□□ 0.48
PTPRO-209ENST00000543886 MYO1EQ12965 1108 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 PCBP1Q15365 356 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPRO-209ENST00000543886 PTPN20Q4JDL3 420 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 SPDYCQ5MJ68 293 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 PPP1R15BQ5SWA1 713 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 NOTUMQ6P988 496 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 ZDHHC24Q6UX98 284 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 GRK7Q8WTQ7 553 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 PPP1R13LQ8WUF5 828 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 RBM41Q96IZ5 413 aaKnown RBP18.05■□□□□ 0.48
PTPRO-209ENST00000543886 TWNKQ96RR1 684 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 OSMRQ99650 979 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 HEMGNQ9BXL5 484 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 OSBPL8Q9BZF1 889 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 RALGAPA2Q2PPJ7 1873 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 MBLAC1A4D2B0 266 aaPredicted RBP18.05■□□□□ 0.48
PTPRO-209ENST00000543886 GOLGA8SH3BPF8 625 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 STAU1O95793 577 aaKnown RBP18.05■□□□□ 0.48
PTPRO-209ENST00000543886 RGS2P41220 211 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 KRT17Q04695 432 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 ZNF252P-AS1Q0IIN9 211 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 ODF2Q5BJF6 829 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 LEKR1Q6ZMV7 388 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 SYDE1Q6ZW31 735 aaPredicted RBP18.05■□□□□ 0.48
PTPRO-209ENST00000543886 RCOR2Q8IZ40 523 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 TTC39CQ8N584 583 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 FBXO25Q8TCJ0 367 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 ATG4AQ8WYN0 398 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 HEXIM2Q96MH2 286 aaKnown RBP18.05■□□□□ 0.48
PTPRO-209ENST00000543886 HERPUD2Q9BSE4 406 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 FAM129AQ9BZQ8 928 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 DCLK3Q9C098 648 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 AP5M1Q9H0R1 490 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 CHST7Q9NS84 486 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 FEZ2Q9UHY8 353 aaPredicted RBP18.05■□□□□ 0.48
PTPRO-209ENST00000543886 DERAQ9Y315 318 aa18.05■□□□□ 0.48
PTPRO-209ENST00000543886 GAS8O95995 478 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 KRT1P04264 644 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 MYL3P08590 195 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 MYZAPP0CAP1 466 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 CYP2B6P20813 491 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 HOXA11P31270 313 aaPredicted RBP18.04■□□□□ 0.48
PTPRO-209ENST00000543886 PSEN2P49810 448 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 PSMC1P62191 440 aaKnown RBP18.04■□□□□ 0.48
PTPRO-209ENST00000543886 CCL14Q16627 93 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 LRRC38Q5VT99 294 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 KCTD16Q68DU8 428 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 RUFY4Q6ZNE9 571 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 CCDC114Q96M63 670 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 FAM124BQ9H5Z6 455 aaPredicted RBP18.04■□□□□ 0.48
PTPRO-209ENST00000543886 KLHL11Q9NVR0 708 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 SNTG2Q9NY99 539 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 BARX2Q9UMQ3 279 aaPredicted RBP18.04■□□□□ 0.48
PTPRO-209ENST00000543886 DOCK3Q8IZD9 2030 aa18.04■□□□□ 0.48
PTPRO-209ENST00000543886 F8VP50 259 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 H0YGN5 161 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 M0QYV0 167 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 MICAL2O94851 1124 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 ITGBL1O95965 494 aaPredicted RBP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 VDRP11473 427 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 DARSP14868 501 aaKnown RBP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 OGDHQ02218 1023 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 CALCOCO2Q13137 446 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 KLF1Q13351 362 aaPredicted RBP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 NIPA2Q8N8Q9 360 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 RNF25Q96BH1 459 aaPredicted RBP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 SNX27Q96L92 541 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 ATP6V1G3Q96LB4 118 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 TXLNGYQ9BZA5 131 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 TRIM6Q9C030 488 aaPredicted RBP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 CDHR5Q9HBB8 845 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 NMRK2Q9NPI5 230 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 WDR35Q9P2L0 1181 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 CYTH4Q9UIA0 394 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 NFS1Q9Y697 457 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 SIGLEC16A6NMB1 481 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 HMGB1P1B2RPK0 211 aaPredicted RBP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 KRT3P12035 628 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 HNRNPH2P55795 449 aaKnown RBP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 ZNF844Q08AG5 666 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 INCA1Q0VD86 236 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 NFX1Q12986 1120 aaKnown RBP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 SH2D3CQ8N5H7 860 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 OR2W6PQ8NHA6 318 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 DNAJB3Q8WWF6 145 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 SOCS4Q8WXH5 440 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 USP6NLQ92738 828 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 CPXM1Q96SM3 734 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 APBA2Q99767 749 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 EIF2AQ9BY44 585 aaKnown RBP18.03■□□□□ 0.48
PTPRO-209ENST00000543886 TSPYL1Q9H0U9 437 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 CENPHQ9H3R5 247 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 TMBIM4Q9HC24 238 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 ASIC3Q9UHC3 531 aa18.03■□□□□ 0.48
PTPRO-209ENST00000543886 HMGCRP04035 888 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms