RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 FAM213AQ9BRX8 229 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 HERC2P3Q9BVR0 1158 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 PDZD7Q9H5P4 517 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 L2HGDHQ9H9P8 463 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 PLEKHA5Q9HAU0 1116 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 RXFP1Q9HBX9 757 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 CHST7Q9NS84 486 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 RBAKQ9NYW8 714 aaPredicted RBP12.29□□□□□ -0.44
COPS7A-217ENST00000543537 ARHGAP20Q9P2F6 1191 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 RNF14Q9UBS8 474 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 PCDHA13Q9Y5I0 950 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 TECTAO75443 2155 aa12.29□□□□□ -0.44
COPS7A-217ENST00000543537 A0A0A6YYK5 440 aaPredicted RBP12.28□□□□□ -0.44
COPS7A-217ENST00000543537 TTLL13PA6NNM8 815 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 RNF225M0QZC1 329 aaPredicted RBP12.28□□□□□ -0.44
COPS7A-217ENST00000543537 DYNC1I1O14576 645 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 NPTXRO95502 500 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 EDN1P05305 212 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 GZMAP12544 262 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 PRLRP16471 622 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 PROZP22891 400 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 DSG1Q02413 1049 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 NAB2Q15742 525 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 ASTE1Q2TB18 679 aaPredicted RBP12.28□□□□□ -0.44
COPS7A-217ENST00000543537 ZACNQ401N2 412 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 KIAA0319Q5VV43 1072 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 HGSNATQ68CP4 663 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 IQCEQ6IPM2 695 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 SV2AQ7L0J3 742 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 TAS1R3Q7RTX0 852 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 CBWD2Q8IUF1 395 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 MNS1Q8NEH6 495 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 LMO3Q8TAP4 145 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 ZNF592Q92610 1267 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 SECISBP2LQ93073 1101 aaKnown RBP12.28□□□□□ -0.44
COPS7A-217ENST00000543537 NOX5Q96PH1 765 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 KLHL5Q96PQ7 755 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 RPS6KC1Q96S38 1066 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 TARS2Q9BW92 718 aaKnown RBP12.28□□□□□ -0.44
COPS7A-217ENST00000543537 EMILIN2Q9BXX0 1053 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 MRPL17Q9NRX2 175 aaKnown RBP12.28□□□□□ -0.44
COPS7A-217ENST00000543537 DNAI1Q9UI46 699 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 LCMT1Q9UIC8 334 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 DERAQ9Y315 318 aa12.28□□□□□ -0.44
COPS7A-217ENST00000543537 F8VZ95 297 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 PHACTR2O75167 634 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 TNNC2P02585 160 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CNPP09543 421 aaKnown RBP12.27□□□□□ -0.45
COPS7A-217ENST00000543537 P4HA1P13674 534 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 AKAP5P24588 427 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 ATICP31939 592 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 MTHFRP42898 656 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 OR1G1P47890 313 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 GCLMP48507 274 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 KLK7P49862 253 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CLCN4P51793 760 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 PPP3CAQ08209 521 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 GOLGA8FQ08AF8 430 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 GOLGA8DPQ0D2H9 430 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 DRAP1Q14919 205 aaPredicted RBP12.27□□□□□ -0.45
COPS7A-217ENST00000543537 SGSM1Q2NKQ1 1148 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CBWD6Q4V339 395 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CBWD3Q5JTY5 395 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CBWD5Q5RIA9 395 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 KIAA1841Q6NSI8 718 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CES5AQ6NT32 575 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 DPY19L2P1Q6NXN4 242 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 LLGL2Q6P1M3 1020 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 SLC39A4Q6P5W5 647 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 SYT10Q6XYQ8 523 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 C15orf39Q6ZRI6 1047 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 BMP8AQ7Z5Y6 402 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CDR2LQ86X02 465 aaPredicted RBP12.27□□□□□ -0.45
COPS7A-217ENST00000543537 SYCE1Q8N0S2 351 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 C17orf53Q8N3J3 647 aaPredicted RBP12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CEP112Q8N8E3 955 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CMASQ8NFW8 434 aaPredicted RBP12.27□□□□□ -0.45
COPS7A-217ENST00000543537 HDAC7Q8WUI4 952 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 AUTS2Q8WXX7 1259 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 EDAQ92838 391 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 CCDC127Q96BQ5 260 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 ANKRD36BP1Q96IX9 119 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 RIPOR3Q96MK2 946 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 NAPGQ99747 312 aaPredicted RBP12.27□□□□□ -0.45
COPS7A-217ENST00000543537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.27□□□□□ -0.45
COPS7A-217ENST00000543537 KIFC3Q9BVG8 833 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 COLEC11Q9BWP8 271 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 RPF1Q9H9Y2 349 aaKnown RBP12.27□□□□□ -0.45
COPS7A-217ENST00000543537 PTPRHQ9HD43 1115 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 SIX2Q9NPC8 291 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 UBE2TQ9NPD8 197 aaPredicted RBP12.27□□□□□ -0.45
COPS7A-217ENST00000543537 MUTYHQ9UIF7 546 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 USTQ9Y2C2 406 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 JRKLQ9Y4A0 524 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 ZNF318Q5VUA4 2279 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 MUC6Q6W4X9 2439 aa12.27□□□□□ -0.45
COPS7A-217ENST00000543537 TRIOO75962 3097 aa12.26□□□□□ -0.45
COPS7A-217ENST00000543537 USP27XA6NNY8 438 aa12.26□□□□□ -0.45
COPS7A-217ENST00000543537 LRRIQ3A6PVS8 624 aaPredicted RBP12.26□□□□□ -0.45
COPS7A-217ENST00000543537 TMEM189-UBE2V1I3L0A0 370 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms