RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 MKS1Q9NXB0 559 aa3.12□□□□□ -1.91
KNTC1-213ENST00000542727 SERGEFQ9UGK8 458 aa3.12□□□□□ -1.91
KNTC1-213ENST00000542727 TRHDEQ9UKU6 1024 aa3.12□□□□□ -1.91
KNTC1-213ENST00000542727 SH2B3Q9UQQ2 575 aa3.12□□□□□ -1.91
KNTC1-213ENST00000542727 IPPQ9Y573 584 aa3.12□□□□□ -1.91
KNTC1-213ENST00000542727 PCDHA13Q9Y5I0 950 aa3.12□□□□□ -1.91
KNTC1-213ENST00000542727 E9PLN8 166 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 MYO1FO00160 1098 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 PPP6CO00743 305 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 TP73O15350 636 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 HTRA2O43464 458 aaPredicted RBP3.11□□□□□ -1.91
KNTC1-213ENST00000542727 ONECUT2O95948 504 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 TUBB4AP04350 444 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 RHOP08100 348 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 FAM163BP0C2L3 166 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 NCLP19338 710 aaKnown RBP3.11□□□□□ -1.91
KNTC1-213ENST00000542727 LPOP22079 712 aaPredicted RBP3.11□□□□□ -1.91
KNTC1-213ENST00000542727 CD6P30203 668 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 PLCD1P51178 756 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 TCF15Q12870 199 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 ABCB5Q2M3G0 1257 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 INAVAQ3KP66 663 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 SFRP4Q6FHJ7 346 aaPredicted RBP3.11□□□□□ -1.91
KNTC1-213ENST00000542727 FAM109AQ8N4B1 249 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 PSD4Q8NDX1 1056 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 C1orf162Q8NEQ5 155 aaPredicted RBP3.11□□□□□ -1.91
KNTC1-213ENST00000542727 NSUN6Q8TEA1 469 aaKnown RBP3.11□□□□□ -1.91
KNTC1-213ENST00000542727 JADE3Q92613 823 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 DDX17Q92841 729 aaKnown RBP3.11□□□□□ -1.91
KNTC1-213ENST00000542727 ZNF48Q96MX3 618 aaPredicted RBP3.11□□□□□ -1.91
KNTC1-213ENST00000542727 VKORC1Q9BQB6 163 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 BRIP1Q9BX63 1249 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 AMBRA1Q9C0C7 1298 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 GPR35Q9HC97 309 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 ARHGEF3Q9NR81 526 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 ETAA1Q9NY74 926 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 TUBD1Q9UJT1 453 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 SLC45A2Q9UMX9 530 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 NOP58Q9Y2X3 529 aaKnown RBP3.11□□□□□ -1.91
KNTC1-213ENST00000542727 MRFAP1Q9Y605 127 aa3.11□□□□□ -1.91
KNTC1-213ENST00000542727 KLHL33A6NCF5 533 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 ALG1L2C9J202 215 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 XPOTO43592 962 aaKnown RBP3.1□□□□□ -1.91
KNTC1-213ENST00000542727 TLR5O60602 858 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 RARBP10826 455 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 C5AR1P21730 350 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 PCSK6P29122 969 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 ALDH9A1P49189 494 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 FXR1P51114 621 aaKnown RBP eCLIP3.1□□□□□ -1.91
KNTC1-213ENST00000542727 KLF9Q13886 244 aaPredicted RBP3.1□□□□□ -1.91
KNTC1-213ENST00000542727 GTF2H3Q13889 308 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 HABP2Q14520 560 aaPredicted RBP3.1□□□□□ -1.91
KNTC1-213ENST00000542727 PCBP2Q15366 365 aaKnown RBP eCLIP3.1□□□□□ -1.91
KNTC1-213ENST00000542727 TBCCQ15814 346 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 ETFDHQ16134 617 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 PTPN21Q16825 1174 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 TMEM119Q4V9L6 283 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 BRDTQ58F21 947 aaPredicted RBP3.1□□□□□ -1.91
KNTC1-213ENST00000542727 RBM20Q5T481 1227 aaKnown RBP3.1□□□□□ -1.91
KNTC1-213ENST00000542727 THEMIS2Q5TEJ8 643 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 SYDE2Q5VT97 1194 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 SLC4A10Q6U841 1118 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 YTHDF3Q7Z739 585 aaKnown RBP3.1□□□□□ -1.91
KNTC1-213ENST00000542727 PNMA8AQ86V59 439 aaPredicted RBP3.1□□□□□ -1.91
KNTC1-213ENST00000542727 FANCBQ8NB91 859 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 RAB24Q969Q5 203 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 ZBTB9Q96C00 473 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 FAXDC2Q96IV6 333 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 ZDHHC8Q9ULC8 765 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 POLHQ9Y253 713 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 ZNF521Q96K83 1311 aa3.1□□□□□ -1.91
KNTC1-213ENST00000542727 CCDC154A6NI56 674 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 ZNF785A8K8V0 405 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 F2RL2O00254 374 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 QSOX1O00391 747 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 TRIM38O00635 465 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 SLC16A6O15403 523 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 GJB1P08034 283 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 MALP21145 153 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 SMARCA1P28370 1054 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 PIK3CGP48736 1102 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 PRAMEF17Q5VTA0 474 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 SLC18B1Q6NT16 456 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 TAF2Q6P1X5 1199 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 SLC30A10Q6XR72 485 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 ZNF66Q6ZN08 573 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 DTX2Q86UW9 622 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 KLHDC4Q8TBB5 520 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 COA7Q96BR5 231 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 REPS1Q96D71 796 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 DMRTA2Q96SC8 542 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 TMEM79Q9BSE2 394 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 WDCPQ9H6R7 721 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 ANLNQ9NQW6 1124 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 TUBA8Q9NY65 449 aaPredicted RBP3.09□□□□□ -1.91
KNTC1-213ENST00000542727 SH3BP4Q9P0V3 963 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 LIMCH1Q9UPQ0 1083 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 RAD54BQ9Y620 910 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 TNKSO95271 1327 aa3.09□□□□□ -1.91
KNTC1-213ENST00000542727 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms