RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 ZNF592Q92610 1267 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 LPIN3Q9BQK8 851 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 KANSL3Q9P2N6 904 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 KIAA1671Q9BY89 1806 aa14.11□□□□□ -0.15
CHFR-221ENST00000542714 NLRC5Q86WI3 1866 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 PTPRDP23468 1912 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 I3L4J1 428 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 GABRDO14764 452 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 ATMINO43313 823 aaPredicted RBP14.1□□□□□ -0.15
CHFR-221ENST00000542714 HUS1O60921 280 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 MICAL2O94851 1124 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 LSM8O95777 96 aaKnown RBP14.1□□□□□ -0.15
CHFR-221ENST00000542714 CYP1A2P05177 515 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 FAM163BP0C2L3 166 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 CSF2RAP15509 400 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 LMO2P25791 158 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 BRCC3P46736 316 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 TCEAL1Q15170 157 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 PAN2Q504Q3 1202 aaKnown RBP14.1□□□□□ -0.15
CHFR-221ENST00000542714 SGO2Q562F6 1265 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 DCLRE1AQ6PJP8 1040 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 DPH6Q7L8W6 267 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 PHF13Q86YI8 300 aaPredicted RBP14.1□□□□□ -0.15
CHFR-221ENST00000542714 MCOLN2Q8IZK6 566 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 C12orf29Q8N999 325 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 C1orf131Q8NDD1 294 aaKnown RBP14.1□□□□□ -0.15
CHFR-221ENST00000542714 OR6B3Q8NGW1 331 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 CTNNBL1Q8WYA6 563 aaPredicted RBP14.1□□□□□ -0.15
CHFR-221ENST00000542714 RFFLQ8WZ73 363 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
CHFR-221ENST00000542714 PDCL3Q9H2J4 239 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 HCSTQ9UBK5 93 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 DNAJB4Q9UDY4 337 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 CYTH4Q9UIA0 394 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 LRFN2Q9ULH4 789 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHFR-221ENST00000542714 COG5Q9UP83 839 aa14.1□□□□□ -0.15
CHFR-221ENST00000542714 GRID2IPA4D2P6 1211 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 A8MXQ7 604 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 TMEM189-UBE2V1I3L0A0 370 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 M0QZQ0 153 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 MED7O43513 233 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 RAG1P15918 1043 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 CASQ1P31415 396 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 GNL1P36915 607 aaPredicted RBP14.09□□□□□ -0.15
CHFR-221ENST00000542714 GPC5P78333 572 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 IKBKEQ14164 716 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 CNGA2Q16280 664 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 CCDC142Q17RM4 750 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 KIAA0319Q5VV43 1072 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 MFSD5Q6N075 450 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 DSTYKQ6XUX3 929 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.09□□□□□ -0.15
CHFR-221ENST00000542714 CRYBG2Q8N1P7 616 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 TPCN2Q8NHX9 752 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 KIF18AQ8NI77 898 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 SLC35G2Q8TBE7 412 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 HASPINQ8TF76 798 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 ZNF653Q96CK0 615 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 NOX5Q96PH1 765 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 LHX5Q9H2C1 402 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 SNX25Q9H3E2 840 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 NRDE2Q9H7Z3 1164 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 OSGEPQ9NPF4 335 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 GTF3C4Q9UKN8 822 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 KIAA1257Q9ULG3 409 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 STXBP5LQ9Y2K9 1186 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 PCDHGC5Q9Y5F6 944 aa14.09□□□□□ -0.15
CHFR-221ENST00000542714 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
CHFR-221ENST00000542714 HOXA2O43364 376 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 PALMO75781 387 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 B3GAT3O94766 335 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 MTA2O94776 668 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 CYP11A1P05108 521 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 PFKMP08237 780 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 PDGFRBP09619 1106 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 MMP8P22894 467 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 NSFP46459 744 aaKnown RBP14.08□□□□□ -0.16
CHFR-221ENST00000542714 HADHBP55084 474 aaKnown RBP14.08□□□□□ -0.16
CHFR-221ENST00000542714 GOLGA7BQ2TAP0 167 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 PKDCCQ504Y2 493 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 C2CD6Q53TS8 623 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 PPP1R26Q5T8A7 1209 aaPredicted RBP14.08□□□□□ -0.16
CHFR-221ENST00000542714 ARHGAP17Q68EM7 881 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 LLGL2Q6P1M3 1020 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 LCLAT1Q6UWP7 414 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 MMS22LQ6ZRQ5 1243 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 TMEM86AQ8N2M4 240 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 LRRC57Q8N9N7 239 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 TMEM35BQ8NCS4 154 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 RSPH1Q8WYR4 309 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 SUSD3Q96L08 255 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 RTP3Q9BQQ7 232 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 C11orf70Q9BRQ4 267 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 ZNF518BQ9C0D4 1074 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 FAM49BQ9NUQ9 324 aa14.08□□□□□ -0.16
CHFR-221ENST00000542714 CHORDC1Q9UHD1 332 aaPredicted RBP14.08□□□□□ -0.16
CHFR-221ENST00000542714 PATJQ8NI35 1801 aa14.07□□□□□ -0.16
CHFR-221ENST00000542714 ABHD14A-ACY1A0A1B0GW23 586 aa14.07□□□□□ -0.16
CHFR-221ENST00000542714 TBKBP1A7MCY6 615 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms