RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 TSPY1Q01534 308 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 GRM2Q14416 872 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 MLF2Q15773 248 aaPredicted RBP17.65■□□□□ 0.42
CCND1-205ENST00000542367 KNOP1Q1ED39 458 aaKnown RBP17.65■□□□□ 0.42
CCND1-205ENST00000542367 BMT2Q1RMZ1 405 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 ITIH5Q86UX2 942 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 TMEM86AQ8N2M4 240 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 DTWD2Q8NBA8 298 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 XXYLT1Q8NBI6 393 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 ZSCAN18Q8TBC5 510 aaPredicted RBP17.65■□□□□ 0.42
CCND1-205ENST00000542367 SPPL2BQ8TCT7 592 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 LPIN3Q9BQK8 851 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 FOXQ1Q9C009 403 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 SLITRK6Q9H5Y7 841 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 TMLHEQ9NVH6 421 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 ABI2Q9NYB9 513 aaPredicted RBP17.65■□□□□ 0.42
CCND1-205ENST00000542367 USP25Q9UHP3 1055 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 HPSEQ9Y251 543 aa17.65■□□□□ 0.42
CCND1-205ENST00000542367 DCNP07585 359 aaKnown RBP17.64■□□□□ 0.41
CCND1-205ENST00000542367 DLATP10515 647 aaKnown RBP17.64■□□□□ 0.41
CCND1-205ENST00000542367 HAPLN1P10915 354 aaPredicted RBP17.64■□□□□ 0.41
CCND1-205ENST00000542367 ATF6P18850 670 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 TNNI1P19237 187 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 VIPR2P41587 438 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 PRKCQQ04759 706 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 MYO1EQ12965 1108 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 STK4Q13043 487 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 VEPH1Q14D04 833 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 GAREM2Q75VX8 874 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 OSTM1Q86WC4 334 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 WDR49Q8IV35 697 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 TOP6BLQ8N6T0 577 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 GIPC2Q8TF65 315 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 CCDC127Q96BQ5 260 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 HPDLQ96IR7 371 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 FNBP1Q96RU3 617 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 ACBD6Q9BR61 282 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 TRMT61BQ9BVS5 477 aaKnown RBP17.64■□□□□ 0.41
CCND1-205ENST00000542367 CGNQ9P2M7 1197 aaKnown RBP17.64■□□□□ 0.41
CCND1-205ENST00000542367 PCDHB5Q9Y5E4 795 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 ATP6V1DQ9Y5K8 247 aa17.64■□□□□ 0.41
CCND1-205ENST00000542367 KANSL1LA0AUZ9 987 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 ACAT1P24752 427 aaKnown RBP17.63■□□□□ 0.41
CCND1-205ENST00000542367 GABRR2P28476 465 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 SYKP43405 635 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 LHX1P48742 406 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 MYL7Q01449 175 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 CYP24A1Q07973 514 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 PSMD2Q13200 908 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 PSMD6Q15008 389 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 TAF12Q16514 161 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 SOWAHAQ2M3V2 549 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 KMT5BQ4FZB7 885 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 STXBP5Q5T5C0 1151 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 VITQ6UXI7 678 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 TRAPPC11Q7Z392 1133 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 C12orf56Q8IXR9 622 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 PI4K2AQ9BTU6 479 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 SCAND2PQ9GZW5 306 aaPredicted RBP17.63■□□□□ 0.41
CCND1-205ENST00000542367 ATXN3LQ9H3M9 355 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 BRD9Q9H8M2 597 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 TRPV4Q9HBA0 871 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 EXOC1Q9NV70 894 aa17.63■□□□□ 0.41
CCND1-205ENST00000542367 COL4A3Q01955 1670 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 FAM237AA0A1B0GTK4 181 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 GABRDO14764 452 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 FGF19O95750 216 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 CST3P01034 146 aaPredicted RBP17.62■□□□□ 0.41
CCND1-205ENST00000542367 PSMC3P17980 439 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 CD72P21854 359 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 NDUFA8P51970 172 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 ANGPT1Q15389 498 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 NFE2Q16621 373 aaPredicted RBP17.62■□□□□ 0.41
CCND1-205ENST00000542367 INTS6LQ5JSJ4 861 aaKnown RBP17.62■□□□□ 0.41
CCND1-205ENST00000542367 DPH6Q7L8W6 267 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 GPIHBP1Q8IV16 184 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 ADGRF2Q8IZF7 708 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 KIAA0895Q8NCT3 520 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 PJA1Q8NG27 643 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 SPATA18Q8TC71 538 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 DDX23Q9BUQ8 820 aaKnown RBP17.62■□□□□ 0.41
CCND1-205ENST00000542367 HEBP1Q9NRV9 189 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 DLGAP2Q9P1A6 1054 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 GTF3C4Q9UKN8 822 aa17.62■□□□□ 0.41
CCND1-205ENST00000542367 CACNA1HO95180 2353 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 HEPACAM2A8MVW5 462 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 HCRTO43612 131 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 EXOC3O60645 756 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 LRRN2O75325 713 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 PRPF40AO75400 957 aaKnown RBP17.61■□□□□ 0.41
CCND1-205ENST00000542367 MYL1P05976 194 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 GDI1P31150 447 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 GPR15P49685 360 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 UBXN2BQ14CS0 331 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 GPR158Q5T848 1215 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 TPRG1Q6ZUI0 275 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 ARID3BQ8IVW6 561 aaPredicted RBP17.61■□□□□ 0.41
CCND1-205ENST00000542367 MFSD6LQ8IWD5 586 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 DEPDC1BQ8WUY9 529 aa17.61■□□□□ 0.41
CCND1-205ENST00000542367 ZNF516Q92618 1163 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms