RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 HEPACAM2A8MVW5 462 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 ARNTLO00327 626 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 ZNF263O14978 683 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 LAMTOR5O43504 91 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 F13A1P00488 732 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 TMEM191BP0C7N4 346 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 ZSCAN22P10073 491 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-206ENST00000542310 HAPLN1P10915 354 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-206ENST00000542310 PTPRDP23468 1912 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 GDI1P31150 447 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 ASIC1P78348 528 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 SURF1Q15526 300 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 NFE2Q16621 373 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-206ENST00000542310 SHC4Q6S5L8 630 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 MAML2Q8IZL2 1156 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-206ENST00000542310 PDCL2Q8N4E4 241 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 ZSWIM2Q8NEG5 633 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 DHX58Q96C10 678 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 MKNK1Q9BUB5 465 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 KIAA1586Q9HCI6 787 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 ABCB6Q9NP58 842 aa16.83■□□□□ 0.28
VPS33A-206ENST00000542310 SPATA6Q9NWH7 488 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-206ENST00000542310 MTF2Q9Y483 593 aaPredicted RBP16.83■□□□□ 0.28
VPS33A-206ENST00000542310 GVINP1Q7Z2Y8 2422 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 CHADO15335 359 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 HUS1O60921 280 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 SOAT2O75908 522 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 LMNAP02545 664 aaKnown RBP16.82■□□□□ 0.28
VPS33A-206ENST00000542310 HSP90AA1P07900 732 aaKnown RBP16.82■□□□□ 0.28
VPS33A-206ENST00000542310 GABRR2P28476 465 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 VIPR2P41587 438 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 SNRPFP62306 86 aaKnown RBP16.82■□□□□ 0.28
VPS33A-206ENST00000542310 RBP5P82980 135 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 EPM2AIP1Q7L775 607 aaPredicted RBP16.82■□□□□ 0.28
VPS33A-206ENST00000542310 ZNF687Q8N1G0 1237 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 TOP6BLQ8N6T0 577 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 FAM200AQ8TCP9 573 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 ANKRD36BP1Q96IX9 119 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 C7orf25Q9BPX7 421 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 LPIN3Q9BQK8 851 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 ACBD6Q9BR61 282 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 MTMR12Q9C0I1 747 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 ATXN3LQ9H3M9 355 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 PRMT8Q9NR22 394 aaPredicted RBP16.82■□□□□ 0.28
VPS33A-206ENST00000542310 ABI2Q9NYB9 513 aaPredicted RBP16.82■□□□□ 0.28
VPS33A-206ENST00000542310 L1RE1Q9UN81 338 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 AGAP1Q9UPQ3 857 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 PCDHB5Q9Y5E4 795 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 PIAS3Q9Y6X2 628 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 GREB1Q4ZG55 1949 aa16.82■□□□□ 0.28
VPS33A-206ENST00000542310 GOLGA8IPA6NC78 632 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 ZNF233A6NK53 670 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 GOLGA8JA6NMD2 632 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 CD72P21854 359 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 DDX6P26196 483 aaKnown RBP eCLIP16.81■□□□□ 0.28
VPS33A-206ENST00000542310 MYL7Q01449 175 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 EHHADHQ08426 723 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 BFSP1Q12934 665 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 INTS6LQ5JSJ4 861 aaKnown RBP16.81■□□□□ 0.28
VPS33A-206ENST00000542310 FAM26FQ5R3K3 315 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 STXBP5Q5T5C0 1151 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 GPR158Q5T848 1215 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 UNC13DQ70J99 1090 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 LRRTM3Q86VH5 581 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 ARID3BQ8IVW6 561 aaPredicted RBP16.81■□□□□ 0.28
VPS33A-206ENST00000542310 YAF2Q8IY57 180 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 ADSSL1Q8N142 457 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 CHRDQ9H2X0 955 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 PCIF1Q9H4Z3 704 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 TASP1Q9H6P5 420 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 IL21Q9HBE4 155 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 PDE11AQ9HCR9 933 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 INTS13Q9NVM9 706 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 HSPBP1Q9NZL4 362 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 TFIP11Q9UBB9 837 aaKnown RBP16.81■□□□□ 0.28
VPS33A-206ENST00000542310 SIX4Q9UIU6 781 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 PCDHGA2Q9Y5H1 932 aa16.81■□□□□ 0.28
VPS33A-206ENST00000542310 SOBPA7XYQ1 873 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 PCSK1P29120 753 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 LHX1P48742 406 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 MYO1EQ12965 1108 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 FZD5Q13467 585 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 TAF12Q16514 161 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 ARHGAP29Q52LW3 1261 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 MAMSTRQ6ZN01 415 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 DPH6Q7L8W6 267 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 WDR49Q8IV35 697 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 ADGRF2Q8IZF7 708 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 CSGALNACT2Q8N6G5 542 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 GLIS3Q8NEA6 775 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 ZNF507Q8TCN5 953 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 CSGALNACT1Q8TDX6 532 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 FAM3CQ92520 227 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 RSPRY1Q96DX4 576 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 C8orf33Q9H7E9 229 aaPredicted RBP16.8■□□□□ 0.28
VPS33A-206ENST00000542310 DDX43Q9NXZ2 648 aaKnown RBP16.8■□□□□ 0.28
VPS33A-206ENST00000542310 FAM13BQ9NYF5 915 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 CFAP45Q9UL16 551 aa16.8■□□□□ 0.28
VPS33A-206ENST00000542310 R3HCC1Q9Y3T6 440 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms