RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 ABCB1P08183 1280 aaPredicted RBP11.68□□□□□ -0.54
CDH3-203ENST00000542274 PLA2G4BP0C869 781 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 IFNA8P32881 189 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 RCN2Q14257 317 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 LIN52Q52LA3 116 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 ARSHQ5FYA8 562 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 C6orf132Q5T0Z8 1188 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 CPLX4Q7Z7G2 160 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 GPBP1Q86WP2 473 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 NXPE3Q969Y0 559 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 WRNIP1Q96S55 665 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 NUF2Q9BZD4 464 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 CTTNBP2NLQ9P2B4 639 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 NKX1-2Q9UD57 310 aaPredicted RBP11.68□□□□□ -0.54
CDH3-203ENST00000542274 DOCK1Q14185 1865 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 EML1O00423 815 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 SNPHO15079 494 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 MSH4O15457 936 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 CHMP2AO43633 222 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 ICMTO60725 284 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 TJP3O95049 919 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 PLEKP08567 350 aaPredicted RBP11.68□□□□□ -0.54
CDH3-203ENST00000542274 CFL1P23528 166 aaKnown RBP11.68□□□□□ -0.54
CDH3-203ENST00000542274 IL32P24001 234 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 RCVRNP35243 200 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 CASP5P51878 434 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 EHHADHQ08426 723 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 DCTN2Q13561 401 aaKnown RBP11.68□□□□□ -0.54
CDH3-203ENST00000542274 KCTD21Q4G0X4 260 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 SND1Q7KZF4 910 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDH3-203ENST00000542274 BEND5Q7L4P6 421 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 PATL1Q86TB9 770 aaKnown RBP11.68□□□□□ -0.54
CDH3-203ENST00000542274 ALPK1Q96QP1 1244 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 AIFM2Q9BRQ8 373 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 CENPKQ9BS16 269 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 SHCBP1LQ9BZQ2 653 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 IKZF4Q9H2S9 585 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 TMEM206Q9H813 350 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 PFDN2Q9UHV9 154 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 STK38LQ9Y2H1 464 aa11.68□□□□□ -0.54
CDH3-203ENST00000542274 C5orf60A6NFR6 353 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 RSPH10B2B2RC85 870 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 TMEM114B3SHH9 223 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 MAP3K6O95382 1288 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 TFPTP0C1Z6 253 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 RSPH10BP0C881 870 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 PTPN2P17706 415 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 TCEA1P23193 301 aaKnown RBP11.67□□□□□ -0.54
CDH3-203ENST00000542274 HSD17B2P37059 387 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 CD83Q01151 205 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 TSPY1Q01534 308 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 ZNF569Q5MCW4 686 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 SLC51BQ86UW2 128 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
CDH3-203ENST00000542274 ARHGAP24Q8N264 748 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 HCAR2Q8TDS4 363 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 NAT14Q8WUY8 206 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 WDR18Q9BV38 432 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 C12orf10Q9HB07 376 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 FAM114A2Q9NRY5 505 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 FAM207AQ9NSI2 230 aaPredicted RBP11.67□□□□□ -0.54
CDH3-203ENST00000542274 IL1RAPL1Q9NZN1 696 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 GMIPQ9P107 970 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 DOLKQ9UPQ8 538 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 PCDHGA3Q9Y5H0 932 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 NUMBLQ9Y6R0 609 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 ZSCAN5BA6NJL1 495 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 E7ENQ6 273 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
CDH3-203ENST00000542274 ADCY3O60266 1144 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 CBFA2T3O75081 653 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 SPATA31C1P0DKV0 1188 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 HNF1BP35680 557 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 MTMR2Q13614 643 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 STILQ15468 1287 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 LRRC55Q6ZSA7 311 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 APOBEC3FQ8IUX4 373 aaKnown RBP11.67□□□□□ -0.54
CDH3-203ENST00000542274 SLC35F6Q8N357 371 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 RIBC1Q8N443 379 aaPredicted RBP11.67□□□□□ -0.54
CDH3-203ENST00000542274 SVIPQ8NHG7 77 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
CDH3-203ENST00000542274 GAB3Q8WWW8 586 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 FBXL18Q96ME1 805 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 HERC2P3Q9BVR0 1158 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 FOXP3Q9BZS1 431 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 TTYH3Q9C0H2 523 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 NEK6Q9HC98 313 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 CYLDQ9NQC7 956 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 SIRT5Q9NXA8 310 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 LRCH1Q9Y2L9 728 aa11.67□□□□□ -0.54
CDH3-203ENST00000542274 CTAGE9A4FU28 777 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 SNTNA6NMZ2 147 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 EIF2B2P49770 351 aaKnown RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 PLTPP55058 493 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 MARSP56192 900 aaKnown RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 SPP2Q13103 211 aa11.66□□□□□ -0.54
CDH3-203ENST00000542274 FAM133BQ5BKY9 247 aaKnown RBP11.66□□□□□ -0.54
CDH3-203ENST00000542274 HERC4Q5GLZ8 1057 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms