RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 KINO60870 393 aaKnown RBP12.26□□□□□ -0.45
VTN-203ENST00000542029 LRRN2O75325 713 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 ITGB3P05106 788 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 HAPLN1P10915 354 aaPredicted RBP12.26□□□□□ -0.45
VTN-203ENST00000542029 CD72P21854 359 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 DDX6P26196 483 aaKnown RBP eCLIP12.26□□□□□ -0.45
VTN-203ENST00000542029 PCSK1P29120 753 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 ASIC1P78348 528 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 PLCB2Q00722 1185 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 MYO1EQ12965 1108 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 E2F4Q16254 413 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 ARHGAP29Q52LW3 1261 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 GPR158Q5T848 1215 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 GAREM2Q75VX8 874 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 DPH6Q7L8W6 267 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 TOP6BLQ8N6T0 577 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 LEO1Q8WVC0 666 aaPredicted RBP12.26□□□□□ -0.45
VTN-203ENST00000542029 ATRIPQ8WXE1 791 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 FAM3CQ92520 227 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 DHX58Q96C10 678 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 IKZF4Q9H2S9 585 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 FAM13BQ9NYF5 915 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 TFIP11Q9UBB9 837 aaKnown RBP12.26□□□□□ -0.45
VTN-203ENST00000542029 CFAP45Q9UL16 551 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 MTF2Q9Y483 593 aaPredicted RBP12.26□□□□□ -0.45
VTN-203ENST00000542029 PCDHGA2Q9Y5H1 932 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 PIAS3Q9Y6X2 628 aa12.26□□□□□ -0.45
VTN-203ENST00000542029 EP300Q09472 2414 aaPredicted RBP12.26□□□□□ -0.45
VTN-203ENST00000542029 DOCK6Q96HP0 2047 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 GOLGA8IPA6NC78 632 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 GOLGA8JA6NMD2 632 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
VTN-203ENST00000542029 TNNC2P02585 160 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 KRT19P08727 400 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 CSH1P0DML2 217 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 CSH2P0DML3 217 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 ZSCAN22P10073 491 aaPredicted RBP12.25□□□□□ -0.45
VTN-203ENST00000542029 RPL10AP62906 217 aaKnown RBP12.25□□□□□ -0.45
VTN-203ENST00000542029 DUOXA2Q1HG44 320 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 FAM26FQ5R3K3 315 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 HS2ST1Q7LGA3 356 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 LRRTM3Q86VH5 581 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 PDCL2Q8N4E4 241 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 TTC9BQ8N6N2 239 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 NOC3LQ8WTT2 800 aaKnown RBP12.25□□□□□ -0.45
VTN-203ENST00000542029 C7orf25Q9BPX7 421 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 CHRDQ9H2X0 955 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 PCIF1Q9H4Z3 704 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 PDE11AQ9HCR9 933 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 INTS13Q9NVM9 706 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 THG1LQ9NWX6 298 aaKnown RBP12.25□□□□□ -0.45
VTN-203ENST00000542029 ZSCAN32Q9NX65 697 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 DDX43Q9NXZ2 648 aaKnown RBP12.25□□□□□ -0.45
VTN-203ENST00000542029 ABI2Q9NYB9 513 aaPredicted RBP12.25□□□□□ -0.45
VTN-203ENST00000542029 CGNQ9P2M7 1197 aaKnown RBP12.25□□□□□ -0.45
VTN-203ENST00000542029 UXTQ9UBK9 157 aaPredicted RBP12.25□□□□□ -0.45
VTN-203ENST00000542029 R4GN57 208 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 UBE4BO95155 1302 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 TRIP11Q15643 1979 aa12.25□□□□□ -0.45
VTN-203ENST00000542029 PVALEFA0A1B0GWK0 134 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 ARNTLO00327 626 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 NRG2O14511 850 aaPredicted RBP12.24□□□□□ -0.45
VTN-203ENST00000542029 SOAT2O75908 522 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 F13A1P00488 732 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 ATF6P18850 670 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 ME1P48163 572 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 KPNA1P52294 538 aaPredicted RBP12.24□□□□□ -0.45
VTN-203ENST00000542029 NRLP54845 237 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 FOXK2Q01167 660 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 CSTF1Q05048 431 aaKnown RBP12.24□□□□□ -0.45
VTN-203ENST00000542029 BFSP1Q12934 665 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 LRRC32Q14392 662 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 INTS6LQ5JSJ4 861 aaKnown RBP12.24□□□□□ -0.45
VTN-203ENST00000542029 SHC4Q6S5L8 630 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 UNC13DQ70J99 1090 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 GVINP1Q7Z2Y8 2422 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 WDR49Q8IV35 697 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 MAML2Q8IZL2 1156 aaPredicted RBP12.24□□□□□ -0.45
VTN-203ENST00000542029 CELF5Q8N6W0 485 aaKnown RBP12.24□□□□□ -0.45
VTN-203ENST00000542029 ZNF507Q8TCN5 953 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 BPIFB1Q8TDL5 484 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 RUBCNQ92622 972 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 FUBP3Q96I24 572 aaKnown RBP eCLIP12.24□□□□□ -0.45
VTN-203ENST00000542029 FNBP1Q96RU3 617 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 LPIN3Q9BQK8 851 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 MKNK1Q9BUB5 465 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 FGFBP2Q9BYJ0 223 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 MTMR12Q9C0I1 747 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 IL21Q9HBE4 155 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 HSPBP1Q9NZL4 362 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 NDRG2Q9UN36 371 aaKnown RBP12.24□□□□□ -0.45
VTN-203ENST00000542029 L1RE1Q9UN81 338 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 SNX9Q9Y5X1 595 aa12.24□□□□□ -0.45
VTN-203ENST00000542029 SHISA7A6NL88 538 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 GABRDO14764 452 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 POLR2DO15514 142 aaKnown RBP12.23□□□□□ -0.45
VTN-203ENST00000542029 FAM163BP0C2L3 166 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 AVPR1AP37288 418 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 CCR3P51677 355 aa12.23□□□□□ -0.45
VTN-203ENST00000542029 WNT7BP56706 349 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms