RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 COL12A1Q99715 3063 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 GOLGA4Q13439 2230 aaKnown RBP10.66□□□□□ -0.7
CHFR-220ENST00000541817 COL5A1P20908 1838 aaPredicted RBP10.66□□□□□ -0.7
CHFR-220ENST00000541817 SMIM28A0A1B0GU29 152 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 K7EQS6 105 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 SYN3O14994 580 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 GNA11P29992 359 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 OSTNP61366 133 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 PLD1Q13393 1074 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 CRY1Q16526 586 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 MAP7D1Q3KQU3 841 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 NCAPH2Q6IBW4 605 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 TPH2Q8IWU9 490 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 C4orf19Q8IY42 314 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 CEP120Q8N960 986 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 HMGB4Q8WW32 186 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 USP13Q92995 863 aaPredicted RBP10.66□□□□□ -0.7
CHFR-220ENST00000541817 C18orf25Q96B23 403 aaPredicted RBP10.66□□□□□ -0.7
CHFR-220ENST00000541817 ERLEC1Q96DZ1 483 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 SPACA7Q96KW9 195 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 ZMAT2Q96NC0 199 aaKnown RBP10.66□□□□□ -0.7
CHFR-220ENST00000541817 ECT2Q9H8V3 914 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 PRMT7Q9NVM4 692 aaPredicted RBP10.66□□□□□ -0.7
CHFR-220ENST00000541817 TOR4AQ9NXH8 423 aa10.66□□□□□ -0.7
CHFR-220ENST00000541817 BCCIPQ9P287 314 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHFR-220ENST00000541817 ATMQ13315 3056 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 KLF18A0A0U1RQI7 1052 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 PLK4O00444 970 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 SLC27A2O14975 620 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 DKC1O60832 514 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHFR-220ENST00000541817 CBFA2T3O75081 653 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 WISP1O95388 367 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 NMT1P30419 496 aaKnown RBP10.65□□□□□ -0.7
CHFR-220ENST00000541817 CLDN6P56747 220 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 AMPD2Q01433 879 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 SEMG2Q02383 582 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 RPL6Q02878 288 aaKnown RBP10.65□□□□□ -0.7
CHFR-220ENST00000541817 BFSP1Q12934 665 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 PRPF4BQ13523 1007 aaKnown RBP10.65□□□□□ -0.7
CHFR-220ENST00000541817 PLEKHG6Q3KR16 790 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 TAF1BQ53T94 588 aaPredicted RBP10.65□□□□□ -0.7
CHFR-220ENST00000541817 EMC10Q5UCC4 262 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 CC2D1AQ6P1N0 951 aaPredicted RBP10.65□□□□□ -0.7
CHFR-220ENST00000541817 PPP4R3CPQ6ZMV5 832 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 LRRC69Q6ZNQ3 347 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 FMNL3Q8IVF7 1028 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 CMTM8Q8IZV2 173 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 LSM14AQ8ND56 463 aaKnown RBP10.65□□□□□ -0.7
CHFR-220ENST00000541817 STKLD1Q8NE28 680 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 BEST2Q8NFU1 509 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 CEP76Q8TAP6 659 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 GIPC2Q8TF65 315 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 RUFY2Q8WXA3 655 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 PSMG2Q969U7 264 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 ADPGKQ9BRR6 497 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 NFKBIZQ9BYH8 718 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 FZD8Q9H461 694 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 IL21Q9HBE4 155 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 IL21RQ9HBE5 538 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 ANO2Q9NQ90 1003 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 DDX25Q9UHL0 483 aaKnown RBP10.65□□□□□ -0.7
CHFR-220ENST00000541817 PCOLCE2Q9UKZ9 415 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 MMP17Q9ULZ9 603 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 PPME1Q9Y570 386 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 WNT6Q9Y6F9 365 aa10.65□□□□□ -0.7
CHFR-220ENST00000541817 CYP3A7-CYP3A51PA0A087WV96 503 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 SGK1O00141 431 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 SGSM2O43147 1006 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 USO1O60763 962 aaKnown RBP10.64□□□□□ -0.71
CHFR-220ENST00000541817 KLF8O95600 359 aaPredicted RBP10.64□□□□□ -0.71
CHFR-220ENST00000541817 SYPP08247 313 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 CYP3A7P24462 503 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 MAOBP27338 520 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 TIE1P35590 1138 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 ZNF33AQ06730 810 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 PPP2R5CQ13362 524 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 LY6DQ14210 128 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 EPHA7Q15375 998 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 TXNDC8Q6A555 127 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 CENPPQ6IPU0 288 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 CLEC17AQ6ZS10 378 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 GPR155Q7Z3F1 870 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 ALLCQ8N6M5 410 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 TXNDC5Q8NBS9 432 aaKnown RBP10.64□□□□□ -0.71
CHFR-220ENST00000541817 BICD2Q8TD16 824 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 CCDC12Q8WUD4 166 aaPredicted RBP10.64□□□□□ -0.71
CHFR-220ENST00000541817 BSNDQ8WZ55 320 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 SUSD3Q96L08 255 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 TRIM4Q9C037 500 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 GZF1Q9H116 711 aaPredicted RBP10.64□□□□□ -0.71
CHFR-220ENST00000541817 POLD4Q9HCU8 107 aa10.64□□□□□ -0.71
CHFR-220ENST00000541817 DENND4CQ5VZ89 1909 aa10.63□□□□□ -0.71
CHFR-220ENST00000541817 MTMR11A4FU01 709 aa10.63□□□□□ -0.71
CHFR-220ENST00000541817 SLC28A2O43868 658 aa10.63□□□□□ -0.71
CHFR-220ENST00000541817 ALDH1A2O94788 518 aa10.63□□□□□ -0.71
CHFR-220ENST00000541817 MARCKSP29966 332 aaPredicted RBP10.63□□□□□ -0.71
CHFR-220ENST00000541817 AVPR1AP37288 418 aa10.63□□□□□ -0.71
CHFR-220ENST00000541817 NEK4P51957 841 aa10.63□□□□□ -0.71
CHFR-220ENST00000541817 NLRP5P59047 1200 aa10.63□□□□□ -0.71
CHFR-220ENST00000541817 CXADRP78310 365 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms