RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 TPCN2Q8NHX9 752 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 WHAMMQ8TF30 809 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 TFAP2BQ92481 460 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 GOLGA1Q92805 767 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 TWNKQ96RR1 684 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 FTHL17Q9BXU8 183 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 FUT8Q9BYC5 575 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 ELOVL4Q9GZR5 314 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 MIOSQ9NXC5 875 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 COG5Q9UP83 839 aa9.23□□□□□ -0.93
THBS3-210ENST00000541576 DCDC2CA8MYV0 355 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 KPNA7A9QM74 516 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 NBNO60934 754 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 CENPCQ03188 943 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 ORC1Q13415 861 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 SV2CQ496J9 727 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 SLC24A5Q71RS6 500 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 ZNF598Q86UK7 904 aaKnown RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 RTN4RL1Q86UN2 441 aaPredicted RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 RHOT2Q8IXI1 618 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 CPA5Q8WXQ8 436 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 TMEM176AQ96HP8 235 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 TSPYL2Q9H2G4 693 aaPredicted RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 ABCB6Q9NP58 842 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 C9IYK1 514 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 ZNF185O15231 689 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 SPTLC1O15269 473 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 MED7O43513 233 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 NDST1P52848 882 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 LILRA4P59901 499 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 NOMO3P69849 1222 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 PPP1R2P3Q6NXS1 205 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 DIS3LQ8TF46 1054 aaKnown RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 LINC01599Q8WXQ3 324 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 ZNF653Q96CK0 615 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 MRPL45Q9BRJ2 306 aaKnown RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 NT5C1AQ9BXI3 368 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 GDAP2Q9NXN4 497 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 GTF3C4Q9UKN8 822 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 PACSIN2Q9UNF0 486 aaPredicted RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 SAR1BQ9Y6B6 198 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 ATMINO43313 823 aaPredicted RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 LSM8O95777 96 aaKnown RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 EOMESO95936 686 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 CTCFP49711 727 aaPredicted RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 TLE2Q04725 743 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 PTPROQ16827 1216 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 TRIM60Q495X7 471 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 C2CD6Q53TS8 623 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 GSPT2Q8IYD1 628 aaKnown RBP9.22□□□□□ -0.93
THBS3-210ENST00000541576 TOX2Q96NM4 488 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 PSMB7Q99436 277 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 HIPK3Q9H422 1215 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 CTTNBP2NLQ9P2B4 639 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 SNX12Q9UMY4 172 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 PCDHGC3Q9UN70 934 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 INPP5FQ9Y2H2 1132 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 CEP83Q9Y592 693 aa9.22□□□□□ -0.93
THBS3-210ENST00000541576 HUS1O60921 280 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 POMCP01189 267 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 COL6A1P12109 1028 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 GJA8P48165 433 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 TUBB2AQ13885 445 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 SOWAHAQ2M3V2 549 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 PLEKHG4Q58EX7 1191 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 MCOLN2Q8IZK6 566 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 GPR161Q8N6U8 529 aaKnown RBP9.21□□□□□ -0.93
THBS3-210ENST00000541576 TMEM35BQ8NCS4 154 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 APPL2Q8NEU8 664 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 DBF4BQ8NFT6 615 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 COG1Q8WTW3 980 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 TRIM11Q96F44 468 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 HEXIM2Q96MH2 286 aaKnown RBP9.21□□□□□ -0.93
THBS3-210ENST00000541576 PNKPQ96T60 521 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 TUBB2BQ9BVA1 445 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 FAM204AQ9H8W3 233 aa9.21□□□□□ -0.93
THBS3-210ENST00000541576 TET1Q8NFU7 2136 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 PODXLO00592 558 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 BUB1BO60566 1050 aaPredicted RBP9.21□□□□□ -0.94
THBS3-210ENST00000541576 CYP1A2P05177 515 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 MYBL1P10243 752 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 VDRP11473 427 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 IGFBP6P24592 240 aaPredicted RBP9.21□□□□□ -0.94
THBS3-210ENST00000541576 CXCR5P32302 372 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 CLCNKBP51801 687 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 FAM189BP81408 668 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 FAAP100Q0VG06 881 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 GRIK3Q13003 919 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 GPNMBQ14956 572 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 TCEAL1Q15170 157 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 MEI1Q5TIA1 1274 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 C1orf53Q5VUE5 145 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 SLFN11Q7Z7L1 901 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 PHLDB2Q86SQ0 1253 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 ANKLE1Q8NAG6 615 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 OR6B3Q8NGW1 331 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 SEPT8Q92599 483 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 CAPZA3Q96KX2 299 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 CACNG4Q9UBN1 327 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 CNOT8Q9UFF9 292 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms