RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 ST3GAL1Q11201 340 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 ENOX2Q16206 610 aaKnown RBP13.26□□□□□ -0.29
SNHG1-216ENST00000541416 RILPL1Q5EBL4 403 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 WDR44Q5JSH3 913 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 C9orf57Q5W0N0 161 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 RNF43Q68DV7 783 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 KCNK18Q7Z418 384 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 KBTBD6Q86V97 674 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 DCP1BQ8IZD4 617 aaKnown RBP13.26□□□□□ -0.29
SNHG1-216ENST00000541416 TTC9BQ8N6N2 239 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 MRPS31Q92665 395 aaKnown RBP13.26□□□□□ -0.29
SNHG1-216ENST00000541416 LPIN3Q9BQK8 851 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 MMTAG2Q9BU76 263 aaKnown RBP13.26□□□□□ -0.29
SNHG1-216ENST00000541416 ZCWPW1Q9H0M4 648 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 ASB7Q9H672 318 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 TDP1Q9NUW8 608 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 TBX20Q9UMR3 447 aa13.26□□□□□ -0.29
SNHG1-216ENST00000541416 K7ENM7 598 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 CYB561D2O14569 222 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 SLC26A4O43511 780 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 FAM13AO94988 1023 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 PIGRP01833 764 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 ADRB2P07550 413 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 ATF6P18850 670 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 PXNP49023 591 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-216ENST00000541416 TAF6P49848 677 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 TOB1P50616 345 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-216ENST00000541416 GUCY2FP51841 1108 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 SLC12A3P55017 1021 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 TSPY1Q01534 308 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 PDGFRLQ15198 375 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 CCDC6Q16204 474 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 PLA2G2CQ5R387 149 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 JADE1Q6IE81 842 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 C11orf74Q86VG3 221 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 CPA6Q8N4T0 437 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 MYCT1Q8N699 235 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 MAB21L3Q8N8X9 362 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 ACDQ96AP0 544 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 FAM83CQ9BQN1 747 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 LSM14BQ9BX40 385 aaKnown RBP13.25□□□□□ -0.29
SNHG1-216ENST00000541416 SLC46A2Q9BY10 475 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 HAPLN2Q9GZV7 340 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 EBF3Q9H4W6 596 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 IL21Q9HBE4 155 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 C2orf42Q9NWW7 574 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 UXTQ9UBK9 157 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-216ENST00000541416 C2CD2Q9Y426 696 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 PCDHB5Q9Y5E4 795 aa13.25□□□□□ -0.29
SNHG1-216ENST00000541416 KIF26AQ9ULI4 1882 aaPredicted RBP13.25□□□□□ -0.29
SNHG1-216ENST00000541416 A0A0B4J269 797 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 PIRO00625 290 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 TM4SF5O14894 197 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 RNF40O75150 1001 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 KCNK5O95279 499 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 APBB3O95704 486 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 KRT18P05783 430 aaKnown RBP13.24□□□□□ -0.29
SNHG1-216ENST00000541416 CSH1P0DML2 217 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 CSH2P0DML3 217 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 IL17AQ16552 155 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 NFE2Q16621 373 aaPredicted RBP13.24□□□□□ -0.29
SNHG1-216ENST00000541416 SV2CQ496J9 727 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 SLFN12LQ6IEE8 588 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 FSTL4Q6MZW2 842 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 OR10T2Q8NGX3 314 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 GIPC2Q8TF65 315 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 CALML4Q96GE6 196 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 AK8Q96MA6 479 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 P2RY13Q9BPV8 354 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 PYM1Q9BRP8 204 aaKnown RBP13.24□□□□□ -0.29
SNHG1-216ENST00000541416 PARVGQ9HBI0 331 aa13.24□□□□□ -0.29
SNHG1-216ENST00000541416 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.24□□□□□ -0.29
SNHG1-216ENST00000541416 ABI2Q9NYB9 513 aaPredicted RBP13.24□□□□□ -0.29
SNHG1-216ENST00000541416 CPSF3Q9UKF6 684 aaKnown RBP13.24□□□□□ -0.29
SNHG1-216ENST00000541416 ZNF638Q14966 1978 aaKnown RBP13.23□□□□□ -0.29
SNHG1-216ENST00000541416 CNOT1A5YKK6 2376 aaKnown RBP13.23□□□□□ -0.29
SNHG1-216ENST00000541416 USP24Q9UPU5 2620 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 FRYQ5TBA9 3013 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 ANO9A1A5B4 782 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 VWA3AA6NCI4 1184 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 TRAK2O60296 914 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 FAM189A1O60320 539 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 TBCAO75347 108 aaKnown RBP13.23□□□□□ -0.29
SNHG1-216ENST00000541416 NEFLP07196 543 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 NFICP08651 508 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 HAPLN1P10915 354 aaPredicted RBP13.23□□□□□ -0.29
SNHG1-216ENST00000541416 PNPLA4P41247 253 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 NLRP12P59046 1061 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 ATP2C1P98194 919 aaPredicted RBP13.23□□□□□ -0.29
SNHG1-216ENST00000541416 POU5F1Q01860 360 aaKnown RBP13.23□□□□□ -0.29
SNHG1-216ENST00000541416 NR1H3Q13133 447 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 ZNF268Q14587 947 aaPredicted RBP13.23□□□□□ -0.29
SNHG1-216ENST00000541416 PLK5Q496M5 336 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 ARL6IP4Q66PJ3 421 aaKnown RBP13.23□□□□□ -0.29
SNHG1-216ENST00000541416 SYT13Q7L8C5 426 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 ATP2A3Q93084 1043 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 ZNF560Q96MR9 790 aa13.23□□□□□ -0.29
SNHG1-216ENST00000541416 PNMA5Q96PV4 448 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms