RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MARCH8Q5T0T0 291 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 MPZL3Q6UWV2 235 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 VSTM1Q6UX27 236 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 ENOSF1Q7L5Y1 443 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 SAPCD2Q86UD0 394 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 HERPUD2Q9BSE4 406 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 NFKBIZQ9BYH8 718 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 KAT6AQ92794 2004 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 UMODL1Q5DID0 1318 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 PASKQ96RG2 1323 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 KRT5P13647 590 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 TAF1CQ15572 869 aaPredicted RBP18.18■□□□□ 0.5
SPIDR-227ENST00000541342 WDR44Q5JSH3 913 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 IQSEC1Q6DN90 963 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 MTHFD1LQ6UB35 978 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 CEP120Q8N960 986 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 SAMD15Q9P1V8 674 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 CTNNAL1Q9UBT7 734 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 GGT7Q9UJ14 662 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 COL1A2P08123 1366 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 A0A087WZ62 844 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 SPOPO43791 374 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 ACSL3O95573 720 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 CDR2Q01850 454 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 C1orf54Q8WWF1 131 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 FDXACB1Q9BRP7 624 aaPredicted RBP18.18■□□□□ 0.5
SPIDR-227ENST00000541342 NOD2Q9HC29 1040 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 DNAH12Q6ZR08 3092 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 MANSC4A6NHS7 340 aaPredicted RBP18.18■□□□□ 0.5
SPIDR-227ENST00000541342 MAGEB2O15479 319 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 IVDP26440 423 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 PDE6CP51160 858 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 MAP2K5Q13163 448 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 MPP2Q14168 576 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 AMHR2Q16671 573 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 RPAINQ86UA6 219 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 SLCO2A1Q92959 643 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.18■□□□□ 0.5
SPIDR-227ENST00000541342 NUB1Q9Y5A7 615 aa18.18■□□□□ 0.5
SPIDR-227ENST00000541342 ECEL1O95672 775 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 CST3P01034 146 aaPredicted RBP18.17■□□□□ 0.5
SPIDR-227ENST00000541342 ACO1P21399 889 aaKnown RBP18.17■□□□□ 0.5
SPIDR-227ENST00000541342 TNFAIP2Q03169 654 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 WDR49Q8IV35 697 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 TMEM192Q8IY95 271 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 THNSL1Q8IYQ7 743 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 FAM212AQ96EL1 285 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 TACO1Q9BSH4 297 aaKnown RBP18.17■□□□□ 0.5
SPIDR-227ENST00000541342 MTMR12Q9C0I1 747 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 AKT3Q9Y243 479 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 OSTNP61366 133 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 GRM1Q13255 1194 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 CROCCP2Q86T23 111 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 LENG1Q96BZ8 264 aaPredicted RBP18.17■□□□□ 0.5
SPIDR-227ENST00000541342 ZNF653Q96CK0 615 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 FGFR1OP2Q9NVK5 253 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 GTF3C4Q9UKN8 822 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 MTUS1Q9ULD2 1270 aa18.17■□□□□ 0.5
SPIDR-227ENST00000541342 TMEM120BA0PK00 339 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 UBOX5O94941 541 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 KRT17Q04695 432 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 CUL2Q13617 745 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 NCOA4Q13772 614 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 GRIK4Q16099 956 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 CCL14Q16627 93 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 DGKDQ16760 1214 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 C17orf99Q6UX52 265 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 TRMT10CQ7L0Y3 403 aaKnown RBP18.16■□□□□ 0.5
SPIDR-227ENST00000541342 MGARPQ8TDB4 240 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 ROPN1BQ9BZX4 212 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-227ENST00000541342 TRIM7Q9C029 511 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 CDT1Q9H211 546 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 ROPN1Q9HAT0 212 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-227ENST00000541342 CHST7Q9NS84 486 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 FSCN2O14926 492 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 HOXC6P09630 235 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 PHKA2P46019 1235 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 RWDD2BP57060 319 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 POU5F1BQ06416 359 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 GALNTL6Q49A17 601 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 RGMBQ6NW40 437 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 IFNL1Q8IU54 200 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 ATG4AQ8WYN0 398 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 RUNDC3BQ96NL0 473 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 GNEQ9Y223 722 aaKnown RBP18.16■□□□□ 0.5
SPIDR-227ENST00000541342 TNFSF13BQ9Y275 285 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 ELF1P32519 619 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 NOP14P78316 857 aaKnown RBP18.16■□□□□ 0.5
SPIDR-227ENST00000541342 ACCSLQ4AC99 568 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 TLDC1Q6P9B6 456 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 TAOK1Q7L7X3 1001 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 TBC1D1Q86TI0 1168 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-227ENST00000541342 IFNLR1Q8IU57 520 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-227ENST00000541342 CCDC63Q8NA47 563 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 PPP1R13LQ8WUF5 828 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 USP6NLQ92738 828 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 ARHGEF2Q92974 986 aaKnown RBP18.16■□□□□ 0.5
SPIDR-227ENST00000541342 FAM81BQ96LP2 452 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 STMN4Q9H169 189 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-227ENST00000541342 SLC5A4Q9NY91 659 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms