RNA–Protein interactions for RNA: ENST00000540393.6

RAP1GAP2-203, Transcript of RAP1 GTPase activating protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAP1GAP2, Length 3,218 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GAP2-203ENST00000540393 DDX3XO00571 662 aaKnown RBP eCLIP12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 HCRTO43612 131 aa12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TNNC2P02585 160 aa12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 HSPA9P38646 679 aaKnown RBP12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 ZNF699Q32M78 642 aa12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 NOP9Q86U38 636 aaKnown RBP12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 C1orf127Q8N9H9 656 aa12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 KIAA1586Q9HCI6 787 aa12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TMEM59LQ9UK28 342 aa12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 STYXL1Q9Y6J8 313 aa12.69□□□□□ -0.38
RAP1GAP2-203ENST00000540393 A0A1B0GUA9 196 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 A6NNZ2 444 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TTI1O43156 1089 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 PAX7P23759 505 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 MFAP3P55082 362 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 ZNF844Q08AG5 666 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TUBB8Q3ZCM7 444 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 ODF2Q5BJF6 829 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 UHMK1Q8TAS1 419 aaKnown RBP12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 LNX1Q8TBB1 728 aaPredicted RBP12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 CPA5Q8WXQ8 436 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 ANKRD36BP1Q96IX9 119 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 PIGRP01833 764 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 ADAM17P78536 824 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 ZNF618Q5T7W0 954 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 NOTUMQ6P988 496 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 SPATS2Q86XZ4 545 aaKnown RBP12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 LPIN3Q9BQK8 851 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TRIM51Q9BSJ1 452 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 PPP1R12CQ9BZL4 782 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 HAUS2Q9NVX0 235 aa12.68□□□□□ -0.38
RAP1GAP2-203ENST00000540393 GTPBP10A4D1E9 387 aaKnown RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 SMIM23A6NLE4 172 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TMEM132DQ14C87 1099 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 PREPLQ4J6C6 727 aaPredicted RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 ARRDC4Q8NCT1 418 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 EDEM3Q9BZQ6 932 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 COL1A2P08123 1366 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TRIP11Q15643 1979 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 HMGB1P1B2RPK0 211 aaPredicted RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 CHUKO15111 745 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 CLTAP09496 248 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 GALCP54803 685 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 JAM2P57087 298 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 MRPS6P82932 125 aaKnown RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 WLSQ5T9L3 541 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 LHX8Q68G74 356 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 SLC27A1Q6PCB7 646 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 BTBD6Q96KE9 485 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 SNX9Q9Y5X1 595 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 C5orf42Q9H799 3197 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 MYO9BQ13459 2157 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 MYO7AQ13402 2215 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 A0A1W2PQ45 241 aaPredicted RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 A0A1W2PQY0 241 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TRAPPC3O43617 180 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 B4GALT4O60513 344 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 GJB6O95452 261 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 POMCP01189 267 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 PROZP22891 400 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 CTNNA1P35221 906 aaKnown RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 MLH1P40692 756 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 CCL23P55773 120 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 SNRPFP62306 86 aaKnown RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TNNC1P63316 161 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 FUKQ8N0W3 1084 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 PCSK9Q8NBP7 692 aaKnown RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TPCN2Q8NHX9 752 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 SYN2Q92777 582 aaPredicted RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 GAD1Q99259 594 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 SMYD3Q9H7B4 428 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 HMGXB4Q9UGU5 601 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 PADI3Q9ULW8 664 aa12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 TIMM13Q9Y5L4 95 aaPredicted RBP12.67□□□□□ -0.38
RAP1GAP2-203ENST00000540393 I3L4J1 428 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 THAP12O43422 761 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 FGGP02679 453 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 FERP16591 822 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 YARSP54577 528 aaKnown RBP12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 DAB2IPQ5VWQ8 1189 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 NAIF1Q69YI7 327 aaPredicted RBP12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 ZNF410Q86VK4 478 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 VPS36Q86VN1 386 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 C1orf131Q8NDD1 294 aaKnown RBP12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 PCDHB18PQ96TA0 734 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 SIX4Q9UIU6 781 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 FBXL5Q9UKA1 691 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 EYSQ5T1H1 3165 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 MGAMO43451 1857 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 GMNCA6NCL1 334 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 CSPG5O95196 566 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 IGHA2P01877 340 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 H2AFZP0C0S5 128 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 BIRC2Q13490 618 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 CUL2Q13617 745 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 CCDC142Q17RM4 750 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 ANKRD20A8PQ5CZ79 823 aa12.66□□□□□ -0.38
RAP1GAP2-203ENST00000540393 CYB5D1Q6P9G0 228 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms