RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 TRIP11Q15643 1979 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 PIK3R2O00459 728 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 ATP2C2O75185 946 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 RRM1P23921 792 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 PSMC1P62191 440 aaKnown RBP11□□□□□ -0.65
PABPC1P4-201ENST00000539977 GRIK3Q13003 919 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 TUSC3Q13454 348 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 TIGD5Q53EQ6 642 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 SGO2Q562F6 1265 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 DSTYKQ6XUX3 929 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11□□□□□ -0.65
PABPC1P4-201ENST00000539977 MCOLN2Q8IZK6 566 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 RNF10Q8N5U6 811 aaKnown RBP11□□□□□ -0.65
PABPC1P4-201ENST00000539977 TRIM58Q8NG06 486 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 TPCN2Q8NHX9 752 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 RFFLQ8WZ73 363 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 FAXDC2Q96IV6 333 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 ALS2CR12Q96Q35 445 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 TRIM7Q9C029 511 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 SNX25Q9H3E2 840 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 TBC1D13Q9NVG8 400 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 TMEM161AQ9NX61 479 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 TJP2Q9UDY2 1190 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 CNOT8Q9UFF9 292 aaKnown RBP11□□□□□ -0.65
PABPC1P4-201ENST00000539977 LRFN2Q9ULH4 789 aa11□□□□□ -0.65
PABPC1P4-201ENST00000539977 PRG3Q9Y2Y8 225 aaPredicted RBP11□□□□□ -0.65
PABPC1P4-201ENST00000539977 SCN1AP35498 2009 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 TET1Q8NFU7 2136 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 TMEM110-MUSTN1A8MSY1 372 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 BTNL10A8MVZ5 291 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 M0QYV0 167 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 O00370 1275 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 BUB1BO60566 1050 aaPredicted RBP10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 MICAL2O94851 1124 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 KIF4AO95239 1232 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 CXCL10P02778 98 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 TUBB4AP04350 444 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 CCDC130P13994 396 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 CSF2RAP15509 400 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 CXCR5P32302 372 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 RPL9P32969 192 aaKnown RBP10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 PBX3P40426 434 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 OR1G1P47890 313 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 CENPCQ03188 943 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 PPP1R26Q5T8A7 1209 aaPredicted RBP10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 CYP4A22Q5TCH4 519 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 CD300LGQ6UXG3 332 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 MON1BQ7L1V2 547 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 CPNE8Q86YQ8 564 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 ABI1Q8IZP0 508 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 NUP85Q9BW27 656 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 ADAM22Q9P0K1 906 aa10.99□□□□□ -0.65
PABPC1P4-201ENST00000539977 TULP2O00295 520 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 ACRP10323 421 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 VDRP11473 427 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 RANBP2P49792 3224 aaKnown RBP10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 BCAR1P56945 870 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 FAM117BQ6P1L5 589 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 LIMS2Q7Z4I7 341 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 DAAM2Q86T65 1068 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 LRRC57Q8N9N7 239 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 TMEM35BQ8NCS4 154 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 LRRN4CLQ8ND94 238 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 URGCPQ8TCY9 931 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 APBB2Q92870 758 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 CASD1Q96PB1 797 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 TSPAN16Q9UKR8 245 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 STXBP5LQ9Y2K9 1186 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 PCDHGC5Q9Y5F6 944 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 NCANO14594 1321 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 A0A0A6YYK5 440 aaPredicted RBP10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 ZNF185O15231 689 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 MED7O43513 233 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 CYP1A2P05177 515 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 RAG1P15918 1043 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 ADORA2BP29275 332 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 CNGA2Q16280 664 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 GOLGA7BQ2TAP0 167 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 KIAA0319Q5VV43 1072 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 TRIM72Q6ZMU5 477 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 TOP6BLQ8N6T0 577 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 CPXM1Q96SM3 734 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 TLR10Q9BXR5 811 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 ST7Q9NRC1 585 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 DDX43Q9NXZ2 648 aaKnown RBP10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 GTF3C4Q9UKN8 822 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 PCDHGC3Q9UN70 934 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 JRKLQ9Y4A0 524 aa10.98□□□□□ -0.65
PABPC1P4-201ENST00000539977 TBKBP1A7MCY6 615 aa10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 NT5C1B-RDH14C9J2C7 533 aa10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 CLDN5O00501 218 aa10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 INPPL1O15357 1258 aa10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 LSM8O95777 96 aaKnown RBP10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 TIMP1P01033 207 aa10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 MMP8P22894 467 aa10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 RGS7P49802 495 aa10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 DSC1Q08554 894 aa10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 PTP4A2Q12974 167 aa10.97□□□□□ -0.65
PABPC1P4-201ENST00000539977 MESDQ14696 234 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 583.1 ms