RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SOAT2O75908 522 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 ITGB3P05106 788 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 PDIA4P13667 645 aaKnown RBP16.47■□□□□ 0.23
UBE3B-211ENST00000539843 WEE1P30291 646 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 ADSSP30520 456 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 RPL10AP62906 217 aaKnown RBP16.47■□□□□ 0.23
UBE3B-211ENST00000539843 AMPD2Q01433 879 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 BFSP1Q12934 665 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 POTEHQ6S545 545 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 MAMSTRQ6ZN01 415 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 GAREM2Q75VX8 874 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 RALGPS2Q86X27 583 aaPredicted RBP16.47■□□□□ 0.23
UBE3B-211ENST00000539843 EFCAB13Q8IY85 973 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 TTC9BQ8N6N2 239 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 CELF5Q8N6W0 485 aaKnown RBP16.47■□□□□ 0.23
UBE3B-211ENST00000539843 ZBTB44Q8NCP5 570 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 SPATA18Q8TC71 538 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 MRPS31Q92665 395 aaKnown RBP16.47■□□□□ 0.23
UBE3B-211ENST00000539843 DNAJC19Q96DA6 116 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 LPIN3Q9BQK8 851 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 TNMDQ9H2S6 317 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 CUEDC2Q9H467 287 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 AGAP1Q9UPQ3 857 aa16.47■□□□□ 0.23
UBE3B-211ENST00000539843 SMG5Q9UPR3 1016 aaKnown RBP16.47■□□□□ 0.23
UBE3B-211ENST00000539843 GVINP1Q7Z2Y8 2422 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 SLC38A8A6NNN8 435 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-211ENST00000539843 PRPF40AO75400 957 aaKnown RBP16.46■□□□□ 0.23
UBE3B-211ENST00000539843 TNNC2P02585 160 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 HSP90AA1P07900 732 aaKnown RBP16.46■□□□□ 0.23
UBE3B-211ENST00000539843 CSH1P0DML2 217 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 CSH2P0DML3 217 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 HAPLN1P10915 354 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-211ENST00000539843 PCSK1P29120 753 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 CXCL12P48061 93 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 RBP5P82980 135 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 STXBP5Q5T5C0 1151 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 CC2D1AQ6P1N0 951 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-211ENST00000539843 FAM173BQ6P4H8 233 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 CRELD2Q6UXH1 353 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-211ENST00000539843 GPD1LQ8N335 351 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 CSGALNACT2Q8N6G5 542 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 PDILTQ8N807 584 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 SUMF1Q8NBK3 374 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 GIPC2Q8TF65 315 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 USP28Q96RU2 1077 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 STRA6Q9BX79 667 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 PANK2Q9BZ23 570 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 EPC1Q9H2F5 836 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 KIF9Q9HAQ2 790 aa16.46■□□□□ 0.23
UBE3B-211ENST00000539843 SOBPA7XYQ1 873 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 ATF6P18850 670 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 LHX1P48742 406 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 CYP4F8P98187 520 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 PUM1Q14671 1186 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBE3B-211ENST00000539843 TSSK4Q6SA08 328 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 DGLUCYQ7Z3D6 616 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 SPEM1Q8N4L4 309 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 LEO1Q8WVC0 666 aaPredicted RBP16.45■□□□□ 0.22
UBE3B-211ENST00000539843 ACBD6Q9BR61 282 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 KIAA1586Q9HCI6 787 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 ABCB6Q9NP58 842 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 DDX43Q9NXZ2 648 aaKnown RBP16.45■□□□□ 0.22
UBE3B-211ENST00000539843 MAGED2Q9UNF1 606 aaPredicted RBP16.45■□□□□ 0.22
UBE3B-211ENST00000539843 MTMR6Q9Y217 621 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 SNX9Q9Y5X1 595 aa16.45■□□□□ 0.22
UBE3B-211ENST00000539843 FRMD3A2A2Y4 597 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 MYBPHLA2RUH7 354 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 ZNF233A6NK53 670 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 SPECC1L-ADORA2AF8WAN1 911 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 ARNTLO00327 626 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 NRG2O14511 850 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-211ENST00000539843 SPTLC2O15270 562 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 LILRB5O75023 590 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 NASPP49321 788 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-211ENST00000539843 KCNA1Q09470 495 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 FZD5Q13467 585 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 ITPRIPL2Q3MIP1 535 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 C4orf50Q6ZRC1 276 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 SPATA2LQ8IUW3 424 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-211ENST00000539843 CMTM8Q8IZV2 173 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 SYNPOQ8N3V7 929 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 PDCL2Q8N4E4 241 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 TOP6BLQ8N6T0 577 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 C1orf127Q8N9H9 656 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 FSIP1Q8NA03 581 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 IQUBQ8NA54 791 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 CBWD1Q9BRT8 395 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 PI4K2AQ9BTU6 479 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 MYO15AQ9UKN7 3530 aa16.44■□□□□ 0.22
UBE3B-211ENST00000539843 COL4A3Q01955 1670 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 EP300Q09472 2414 aaPredicted RBP16.43■□□□□ 0.22
UBE3B-211ENST00000539843 GOLGA8IPA6NC78 632 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 GOLGA8JA6NMD2 632 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 PPP6R2O75170 966 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 PRPF6O94906 941 aaKnown RBP16.43■□□□□ 0.22
UBE3B-211ENST00000539843 CHRNB1P11230 501 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 CTHP32929 405 aa16.43■□□□□ 0.22
UBE3B-211ENST00000539843 ASIC1P78348 528 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms