RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TNIP3Q96KP6 325 aa16.46■□□□□ 0.23
DDB1-216ENST00000539739 ACBD6Q9BR61 282 aa16.46■□□□□ 0.23
DDB1-216ENST00000539739 NT5C1AQ9BXI3 368 aa16.46■□□□□ 0.23
DDB1-216ENST00000539739 EDEM3Q9BZQ6 932 aa16.46■□□□□ 0.23
DDB1-216ENST00000539739 NLRC4Q9NPP4 1024 aa16.46■□□□□ 0.23
DDB1-216ENST00000539739 STXBP5LQ9Y2K9 1186 aa16.46■□□□□ 0.23
DDB1-216ENST00000539739 BACE2Q9Y5Z0 518 aa16.46■□□□□ 0.23
DDB1-216ENST00000539739 EPOPA6NHQ4 379 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 SOX1O00570 391 aaPredicted RBP16.45■□□□□ 0.22
DDB1-216ENST00000539739 EPHB6O15197 1021 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 CILPO75339 1184 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 PDGFRBP09619 1106 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 DNAJB1P25685 340 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 ERVFC1P60507 584 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 TSPY1Q01534 308 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 DRAP1Q14919 205 aaPredicted RBP16.45■□□□□ 0.22
DDB1-216ENST00000539739 PTPN14Q15678 1187 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 PLPP4Q5VZY2 271 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 PRSS55Q6UWB4 352 aaPredicted RBP16.45■□□□□ 0.22
DDB1-216ENST00000539739 PPFIBP1Q86W92 1011 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 OSTM1Q86WC4 334 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 ZNF397Q8NF99 534 aaPredicted RBP16.45■□□□□ 0.22
DDB1-216ENST00000539739 NAA15Q9BXJ9 866 aaKnown RBP16.45■□□□□ 0.22
DDB1-216ENST00000539739 MTRRQ9UBK8 725 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 CDH9Q9ULB4 789 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 IRAK3Q9Y616 596 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.45■□□□□ 0.22
DDB1-216ENST00000539739 FSCN2O14926 492 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 CSPG5O95196 566 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 KRT5P13647 590 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 LMO2P25791 158 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 USP8P40818 1118 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 TMEM270Q6UE05 265 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 TMC6Q7Z403 805 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 FMNL3Q8IVF7 1028 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 MRPL43Q8N983 215 aaKnown RBP16.45■□□□□ 0.22
DDB1-216ENST00000539739 AUTS2Q8WXX7 1259 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 SHC3Q92529 594 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 LRCH3Q96II8 777 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 ZNF830Q96NB3 372 aaPredicted RBP16.45■□□□□ 0.22
DDB1-216ENST00000539739 PPP1R9BQ96SB3 815 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 EMILIN2Q9BXX0 1053 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 FNIP2Q9P278 1114 aa16.45■□□□□ 0.22
DDB1-216ENST00000539739 MYO9BQ13459 2157 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 PLXNA4Q9HCM2 1894 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 RFXAPO00287 272 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 LILRB3O75022 631 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 ACO1P21399 889 aaKnown RBP16.44■□□□□ 0.22
DDB1-216ENST00000539739 STAT1P42224 750 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 CAMK1Q14012 370 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 ZNF394Q53GI3 561 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 HABP4Q5JVS0 413 aaKnown RBP16.44■□□□□ 0.22
DDB1-216ENST00000539739 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 DCP1BQ8IZD4 617 aaKnown RBP16.44■□□□□ 0.22
DDB1-216ENST00000539739 UBR7Q8N806 425 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 TMEM176AQ96HP8 235 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 SYT15Q9BQS2 421 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 TTYH1Q9H313 450 aaPredicted RBP16.44■□□□□ 0.22
DDB1-216ENST00000539739 RXFP1Q9HBX9 757 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 AJAP1Q9UKB5 411 aaPredicted RBP16.44■□□□□ 0.22
DDB1-216ENST00000539739 MYO6Q9UM54 1294 aa16.44■□□□□ 0.22
DDB1-216ENST00000539739 A0A1W2PQJ5 194 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 F8VZ95 297 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 FOXN3O00409 490 aaPredicted RBP16.43■□□□□ 0.22
DDB1-216ENST00000539739 CLGNO14967 610 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 TBC1D4O60343 1298 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 ACAT1P24752 427 aaKnown RBP16.43■□□□□ 0.22
DDB1-216ENST00000539739 CDC25BP30305 580 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 MAPRE1Q15691 268 aaKnown RBP16.43■□□□□ 0.22
DDB1-216ENST00000539739 GPR153Q6NV75 609 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.43■□□□□ 0.22
DDB1-216ENST00000539739 RBBP8NLQ8NC74 664 aaPredicted RBP16.43■□□□□ 0.22
DDB1-216ENST00000539739 WHAMMQ8TF30 809 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 CPLX3Q8WVH0 158 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 MRPL38Q96DV4 380 aaKnown RBP16.43■□□□□ 0.22
DDB1-216ENST00000539739 RTP3Q9BQQ7 232 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 TTYH3Q9C0H2 523 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 TSPYL1Q9H0U9 437 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 CAPN11Q9UMQ6 739 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 CNTN6Q9UQ52 1028 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 LUC7L2Q9Y383 392 aaKnown RBP16.43■□□□□ 0.22
DDB1-216ENST00000539739 CDY1Q9Y6F8 540 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 VWA8A3KMH1 1905 aa16.43■□□□□ 0.22
DDB1-216ENST00000539739 C2orf71A6NGG8 1288 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 ADH1AP07327 375 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 PAEPP09466 180 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 CPB1P15086 417 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 PTPN1P18031 435 aaKnown RBP16.42■□□□□ 0.22
DDB1-216ENST00000539739 RPL17P18621 184 aaKnown RBP16.42■□□□□ 0.22
DDB1-216ENST00000539739 MSNP26038 577 aaKnown RBP16.42■□□□□ 0.22
DDB1-216ENST00000539739 OR1D2P34982 312 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 IRS1P35568 1242 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 NDUFV1P49821 464 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 ARPP19P56211 112 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 JAM2P57087 298 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 BPIFB4P59827 614 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 SMARCB1Q12824 385 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 INTS6LQ5JSJ4 861 aaKnown RBP16.42■□□□□ 0.22
DDB1-216ENST00000539739 SLC8B1Q6J4K2 584 aa16.42■□□□□ 0.22
DDB1-216ENST00000539739 ACOT1Q86TX2 421 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms