RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CLEC16AQ2KHT3 1053 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 SGO2Q562F6 1265 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 TRIM72Q6ZMU5 477 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 ACOT1Q86TX2 421 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 METTL23Q86XA0 190 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 DNAAF5Q86Y56 855 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 PASD1Q8IV76 773 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 SUSD3Q96L08 255 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 ZSWIM1Q9BR11 485 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 COLEC11Q9BWP8 271 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 PACSIN1Q9BY11 444 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 TAS2R14Q9NYV8 317 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 KIAA1257Q9ULG3 409 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 STXBP5LQ9Y2K9 1186 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 FAN1Q9Y2M0 1017 aa17.19■□□□□ 0.34
TRAF3-204ENST00000539721 TIMM13Q9Y5L4 95 aaPredicted RBP17.19■□□□□ 0.34
TRAF3-204ENST00000539721 RCCD1A6NED2 376 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 HCRTO43612 131 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 RTN2O75298 545 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 TADA2AO75478 443 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 H2AFZP0C0S5 128 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 GZMAP12544 262 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 LMO2P25791 158 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 LHX1P48742 406 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 KIF5AQ12840 1032 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 H2AFVQ71UI9 128 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 TSGA10Q9BZW7 698 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 LACRTQ9GZZ8 138 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 DPEP3Q9H4B8 488 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 DSEQ9UL01 958 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 PCDHGC3Q9UN70 934 aa17.18■□□□□ 0.34
TRAF3-204ENST00000539721 GABRDO14764 452 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 KRT86O43790 486 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 CYP1A1P04798 512 aaPredicted RBP17.17■□□□□ 0.34
TRAF3-204ENST00000539721 ARHGAP25P42331 645 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 EPHB4P54760 987 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 TMEM240Q5SV17 173 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 ZNF689Q96CS4 500 aaPredicted RBP17.17■□□□□ 0.34
TRAF3-204ENST00000539721 CYFIP2Q96F07 1278 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 TNIP3Q96KP6 325 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 LBHD1Q9BQE6 289 aaPredicted RBP17.17■□□□□ 0.34
TRAF3-204ENST00000539721 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRAF3-204ENST00000539721 ISCUQ9H1K1 167 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 DDX43Q9NXZ2 648 aaKnown RBP17.17■□□□□ 0.34
TRAF3-204ENST00000539721 TRIM10Q9UDY6 481 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 ADAM28Q9UKQ2 775 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 PCDHB8Q9UN66 801 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 ATP8B3O60423 1300 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 PJA2O43164 708 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 TRAPPC3O43617 180 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 FTLP02792 175 aaPredicted RBP17.17■□□□□ 0.34
TRAF3-204ENST00000539721 CYP11A1P05108 521 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 GALTP07902 379 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 UNGP13051 313 aaPredicted RBP17.17■□□□□ 0.34
TRAF3-204ENST00000539721 GALCP54803 685 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 ACAD10Q6JQN1 1059 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 ZNF662Q6ZS27 426 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 CRYBG2Q8N1P7 616 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 C12orf29Q8N999 325 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 SPATA18Q8TC71 538 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 RC3H2Q9HBD1 1191 aaKnown RBP17.17■□□□□ 0.34
TRAF3-204ENST00000539721 INTUQ9ULD6 942 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 GUCA1BQ9UMX6 200 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 CEP83Q9Y592 693 aa17.17■□□□□ 0.34
TRAF3-204ENST00000539721 ABL1P00519 1130 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 TYMPP19971 482 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 ACAT1P24752 427 aaKnown RBP17.16■□□□□ 0.34
TRAF3-204ENST00000539721 PBX3P40426 434 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 BCAR1P56945 870 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 NOMO3P69849 1222 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 BTG3Q14201 252 aaPredicted RBP17.16■□□□□ 0.34
TRAF3-204ENST00000539721 STILQ15468 1287 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 CNGA2Q16280 664 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 SPOUT1Q5T280 376 aaKnown RBP17.16■□□□□ 0.34
TRAF3-204ENST00000539721 NAA35Q5VZE5 725 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 CMTR2Q8IYT2 770 aaKnown RBP17.16■□□□□ 0.34
TRAF3-204ENST00000539721 CPA5Q8WXQ8 436 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 C16orf45Q96MC5 204 aaPredicted RBP17.16■□□□□ 0.34
TRAF3-204ENST00000539721 CWH43Q9H720 699 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 FAM49BQ9NUQ9 324 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 MARCH5Q9NX47 278 aa17.16■□□□□ 0.34
TRAF3-204ENST00000539721 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRAF3-204ENST00000539721 NT5C1B-RDH14C9J2C7 533 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 O00370 1275 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 MICAL2O94851 1124 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 LSM8O95777 96 aaKnown RBP17.15■□□□□ 0.34
TRAF3-204ENST00000539721 ABCB4P21439 1286 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 NSFP46459 744 aaKnown RBP17.15■□□□□ 0.34
TRAF3-204ENST00000539721 PSMC1P62191 440 aaKnown RBP17.15■□□□□ 0.34
TRAF3-204ENST00000539721 CENPCQ03188 943 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 PTPN14Q15678 1187 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 OVOS1Q6IE37 1185 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 DENND1BQ6P3S1 775 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 B3GALNT2Q8NCR0 500 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 TMEM35BQ8NCS4 154 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 CTNNBL1Q8WYA6 563 aaPredicted RBP17.15■□□□□ 0.34
TRAF3-204ENST00000539721 YME1L1Q96TA2 773 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 LPIN3Q9BQK8 851 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 SYT15Q9BQS2 421 aa17.15■□□□□ 0.34
TRAF3-204ENST00000539721 ANKRD62A6NC57 917 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms