RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 TRIM54Q9BYV2 358 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CPEB1Q9BZB8 566 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 RANBP17Q9H2T7 1088 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SMOC2Q9H3U7 446 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SMURF2Q9HAU4 748 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 FBXO34Q9NWN3 711 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 GPRC5DQ9NZD1 345 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 EPS15L1Q9UBC2 864 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SRP68Q9UHB9 627 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 MBD1Q9UIS9 605 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 A8MVJ9 347 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 hCG_1984214I3L0E3 225 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 THAP12O43422 761 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 ITGA10O75578 1167 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 RAD17O75943 681 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SCGB1D1O95968 90 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 FTLP02792 175 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 IFIT2P09913 472 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SLC6A2P23975 617 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 FASLGP48023 281 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 FMO1Q01740 532 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 DUSP8Q13202 625 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PLCL1Q15111 1095 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 UBE3CQ15386 1083 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TAF5Q15542 800 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SLC35G1Q2M3R5 365 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 FBXO47Q5MNV8 452 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SPOUT1Q5T280 376 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 KRTAP5-4Q6L8H1 288 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 MZT2BQ6NZ67 158 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CNKSR3Q6P9H4 555 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PRR23BQ6ZRT6 265 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 TMPRSS9Q7Z410 1059 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF605Q86T29 641 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SLC30A5Q8TAD4 765 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 ASB12Q8WXK4 309 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 MCRS1Q96EZ8 462 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 KIRREL1Q96J84 757 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PPP1R9BQ96SB3 815 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 GPHA2Q96T91 129 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PSMD1Q99460 953 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 NOL10Q9BSC4 688 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 REXO4Q9GZR2 422 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 CD320Q9NPF0 282 aa1.26□□□□□ -2.21
HIF1A-204ENST00000539097 SPATA6Q9NWH7 488 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PIH1D1Q9NWS0 290 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 PUF60Q9UHX1 559 aaKnown RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 LEF1Q9UJU2 399 aaPredicted RBP1.26□□□□□ -2.21
HIF1A-204ENST00000539097 A0A087WV62 115 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 A0A1W2PPC4 97 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 POM121BA6NF01 834 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MBD3L5A6NJ08 208 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CCDC188H7C350 402 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 F2RL2O00254 374 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 PQBP1O60828 265 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 LARGE1O95461 756 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 NTSR2O95665 410 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 PYGLP06737 847 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 DLDP09622 509 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SETSIPP0DME0 302 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 HARSP12081 509 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ATP1A3P13637 1013 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TECP42680 631 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 LOXL3P58215 753 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 NHLH1Q02575 133 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF543Q08ER8 600 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MTM1Q13496 603 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 RAB3GAP1Q15042 981 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 RNF151Q2KHN1 245 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 C15orf59Q2T9L4 293 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ZIK1Q3SY52 487 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 KHDC1Q4VXA5 237 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 VWA3BQ502W6 1294 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SLFN13Q68D06 897 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 KIAA0895LQ68EN5 471 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CCDC70Q6NSX1 233 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TMEM88Q6PEY1 159 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 C1orf228Q6PIY5 440 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SARM1Q6SZW1 724 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ZDHHC24Q6UX98 284 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 UBE3BQ7Z3V4 1068 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 HEATR4Q86WZ0 1026 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MCEMP1Q8IX19 187 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 YAF2Q8IY57 180 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 FAM186BQ8IYM0 893 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TMEFF1Q8IYR6 380 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TMIEQ8NEW7 156 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CXorf38Q8TB03 319 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 MDM1Q8TC05 714 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 BICD2Q8TD16 824 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 ADAMTS15Q8TE58 950 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SNX27Q96L92 541 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 SIGLEC10Q96LC7 697 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 GPR20Q99678 358 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 PRRX2Q99811 253 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 TLR10Q9BXR5 811 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 A1CFQ9NQ94 594 aaKnown RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 C9orf78Q9NZ63 289 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-204ENST00000539097 CPA4Q9UI42 421 aa1.25□□□□□ -2.21
HIF1A-204ENST00000539097 DTNAQ9Y4J8 743 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms