RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 NUP210Q8TEM1 1887 aaPredicted RBP13.5□□□□□ -0.25
VAMP1-206ENST00000538970 KPNA7A9QM74 516 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 GAP43P17677 238 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 SYT1P21579 422 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 WEE1P30291 646 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 CDC25CP30307 473 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 SOX9P48436 509 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 CCR3P51677 355 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 CDR1P51861 262 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 CASP5P51878 434 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 CYP4F8P98187 520 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 SMARCB1Q12824 385 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 POSTNQ15063 836 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 SV2CQ496J9 727 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 ARHGAP29Q52LW3 1261 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 ARHGAP15Q53QZ3 475 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 SV2BQ7L1I2 683 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 LRRTM3Q86VH5 581 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 BRSK2Q8IWQ3 736 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 THEM5Q8N1Q8 247 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 FAM200AQ8TCP9 573 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 SPPL2BQ8TCT7 592 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 ZNF560Q96MR9 790 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 ACCSQ96QU6 501 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 C8orf33Q9H7E9 229 aaPredicted RBP13.5□□□□□ -0.25
VAMP1-206ENST00000538970 OLFML3Q9NRN5 406 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 TBC1D7Q9P0N9 293 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 EXOC7Q9UPT5 735 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 MORC2Q9Y6X9 1032 aaPredicted RBP13.5□□□□□ -0.25
VAMP1-206ENST00000538970 CHD8Q9HCK8 2581 aa13.5□□□□□ -0.25
VAMP1-206ENST00000538970 FRMD3A2A2Y4 597 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 MYBPHLA2RUH7 354 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 SPECC1L-ADORA2AF8WAN1 911 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 DPYSL4O14531 572 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 GCNT3O95395 438 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 HAPLN1P10915 354 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-206ENST00000538970 HOXB3P14651 431 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-206ENST00000538970 PNPLA4P41247 253 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 KPNA1P52294 538 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-206ENST00000538970 NRLP54845 237 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 CEBPZQ03701 1054 aaKnown RBP13.49□□□□□ -0.25
VAMP1-206ENST00000538970 LRRC32Q14392 662 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 GAS6Q14393 721 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 PPP2R5DQ14738 602 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 WDR44Q5JSH3 913 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 TXNDC11Q6PKC3 985 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 CCDC73Q6ZRK6 1079 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 ZSWIM2Q8NEG5 633 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 SAAL1Q96ER3 474 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 CHAMP1Q96JM3 812 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 ZFYVE19Q96K21 471 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 GCNAQ96QF7 691 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 FGFBP2Q9BYJ0 223 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 TASP1Q9H6P5 420 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 ABI2Q9NYB9 513 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-206ENST00000538970 CDV3Q9UKY7 258 aaKnown RBP13.49□□□□□ -0.25
VAMP1-206ENST00000538970 SCN1AP35498 2009 aa13.49□□□□□ -0.25
VAMP1-206ENST00000538970 F5P12259 2224 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 A0A087X0B3 334 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 ITGB3P05106 788 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 IDEP14735 1019 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 GARTP22102 1010 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 TGM1P22735 817 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 POLR2BP30876 1174 aaKnown RBP13.48□□□□□ -0.25
VAMP1-206ENST00000538970 CTHP32929 405 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 STAT6P42226 847 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 TFAMQ00059 246 aaKnown RBP13.48□□□□□ -0.25
VAMP1-206ENST00000538970 SATB1Q01826 763 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 ALCAMQ13740 583 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 TMEM150AQ86TG1 271 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 RALGPS2Q86X27 583 aaPredicted RBP13.48□□□□□ -0.25
VAMP1-206ENST00000538970 DCP1BQ8IZD4 617 aaKnown RBP13.48□□□□□ -0.25
VAMP1-206ENST00000538970 SPEM1Q8N4L4 309 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 C1orf127Q8N9H9 656 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 TTC8Q8TAM2 541 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 CXorf38Q8TB03 319 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 BPIFB1Q8TDL5 484 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 GIPC2Q8TF65 315 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 USP28Q96RU2 1077 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 SMG9Q9H0W8 520 aaKnown RBP13.48□□□□□ -0.25
VAMP1-206ENST00000538970 RBM12Q9NTZ6 932 aaKnown RBP13.48□□□□□ -0.25
VAMP1-206ENST00000538970 TMLHEQ9NVH6 421 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
VAMP1-206ENST00000538970 GTSE1Q9NYZ3 720 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 PCDHB13Q9Y5F0 798 aa13.48□□□□□ -0.25
VAMP1-206ENST00000538970 KIF26AQ9ULI4 1882 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-206ENST00000538970 PAPSS2O95340 614 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-206ENST00000538970 LDHAP00338 332 aaKnown RBP13.47□□□□□ -0.25
VAMP1-206ENST00000538970 HMGA1P17096 107 aaKnown RBP13.47□□□□□ -0.25
VAMP1-206ENST00000538970 CXCL12P48061 93 aa13.47□□□□□ -0.25
VAMP1-206ENST00000538970 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
VAMP1-206ENST00000538970 TNK2Q07912 1038 aa13.47□□□□□ -0.25
VAMP1-206ENST00000538970 SLC39A14Q15043 492 aa13.47□□□□□ -0.25
VAMP1-206ENST00000538970 TAF12Q16514 161 aa13.47□□□□□ -0.25
VAMP1-206ENST00000538970 DGKKQ5KSL6 1271 aa13.47□□□□□ -0.25
VAMP1-206ENST00000538970 Q6ZS52 159 aa13.47□□□□□ -0.25
VAMP1-206ENST00000538970 PDCL2Q8N4E4 241 aa13.47□□□□□ -0.25
VAMP1-206ENST00000538970 GPR161Q8N6U8 529 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms