RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 DDX27Q96GQ7 796 aaKnown RBP21.61■■□□□ 1.05
DDX55-205ENST00000538744 HEXIM2Q96MH2 286 aaKnown RBP21.61■■□□□ 1.05
DDX55-205ENST00000538744 MCEEQ96PE7 176 aa21.61■■□□□ 1.05
DDX55-205ENST00000538744 NT5C1AQ9BXI3 368 aa21.61■■□□□ 1.05
DDX55-205ENST00000538744 ST7Q9NRC1 585 aa21.61■■□□□ 1.05
DDX55-205ENST00000538744 XPOTO43592 962 aaKnown RBP21.6■■□□□ 1.05
DDX55-205ENST00000538744 MICAL2O94851 1124 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 HMGCRP04035 888 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 ATF7P17544 494 aaPredicted RBP21.6■■□□□ 1.05
DDX55-205ENST00000538744 AKAP5P24588 427 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 AARSP49588 968 aaKnown RBP eCLIP21.6■■□□□ 1.05
DDX55-205ENST00000538744 HLTFQ14527 1009 aaKnown RBP eCLIP21.6■■□□□ 1.05
DDX55-205ENST00000538744 CYP1B1Q16678 543 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 PTPN20Q4JDL3 420 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 GLRA4Q5JXX5 417 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 PPP1R15BQ5SWA1 713 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 CYP4A22Q5TCH4 519 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 RSPH3Q86UC2 560 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 MAIP1Q8WWC4 291 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 SEC14L1Q92503 715 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 MAGOHBQ96A72 148 aaKnown RBP21.6■■□□□ 1.05
DDX55-205ENST00000538744 C18orf25Q96B23 403 aaPredicted RBP21.6■■□□□ 1.05
DDX55-205ENST00000538744 RUNDC3BQ96NL0 473 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 USTQ9Y2C2 406 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 H3BQF6 201 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 O00370 1275 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 FSCN2O14926 492 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 CD4P01730 458 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 CACNB2Q08289 660 aaPredicted RBP21.6■■□□□ 1.05
DDX55-205ENST00000538744 TRIM32Q13049 653 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 TRADDQ15628 312 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 HSP90B2PQ58FF3 399 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 XKR4Q5GH76 650 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 FAM228AQ86W67 206 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 KATNAL2Q8IYT4 538 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 MED4Q9NPJ6 270 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 FAM114A2Q9NRY5 505 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 WDR35Q9P2L0 1181 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 PARP2Q9UGN5 583 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 PCYOX1Q9UHG3 505 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 CYTH4Q9UIA0 394 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 RASAL2Q9UJF2 1139 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 TRPV2Q9Y5S1 764 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 SNX9Q9Y5X1 595 aa21.6■■□□□ 1.05
DDX55-205ENST00000538744 M0QYV0 167 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 PPEF2O14830 753 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 KCNE1P15382 129 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 GSCP56915 257 aaPredicted RBP21.59■■□□□ 1.05
DDX55-205ENST00000538744 TAS2R40P59535 323 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 SIX1Q15475 284 aaPredicted RBP21.59■■□□□ 1.05
DDX55-205ENST00000538744 C9orf57Q5W0N0 161 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 GDF6Q6KF10 455 aaPredicted RBP21.59■■□□□ 1.05
DDX55-205ENST00000538744 ZDHHC14Q8IZN3 488 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 C12orf50Q8NA57 414 aaPredicted RBP21.59■■□□□ 1.05
DDX55-205ENST00000538744 C18orf8Q96DM3 657 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 XPNPEP3Q9NQH7 507 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 IPPQ9Y573 584 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 CDY2AQ9Y6F7 541 aa21.59■■□□□ 1.05
DDX55-205ENST00000538744 SMIM28A0A1B0GU29 152 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 TCRBV7S2A1N4TA0A589 114 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 ADAMTS4O75173 837 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 FAM153BP0C7A2 387 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 RARAP10276 462 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 SSR1P43307 286 aaKnown RBP21.58■■□□□ 1.05
DDX55-205ENST00000538744 GABPB1Q06547 395 aaPredicted RBP21.58■■□□□ 1.05
DDX55-205ENST00000538744 PIGHQ14442 188 aaPredicted RBP21.58■■□□□ 1.05
DDX55-205ENST00000538744 STILQ15468 1287 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 FAM153CQ494X1 144 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 FAM47CQ5HY64 1035 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 DAB2IPQ5VWQ8 1189 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 TWF2Q6IBS0 349 aaKnown RBP21.58■■□□□ 1.05
DDX55-205ENST00000538744 TRIM51Q9BSJ1 452 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 SYNCQ9H7C4 482 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 KLK14Q9P0G3 267 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 FAM153AQ9UHL3 310 aa21.58■■□□□ 1.05
DDX55-205ENST00000538744 SIGLEC16A6NMB1 481 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 DAPK3O43293 454 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 AOC2O75106 756 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 RPLP2P05387 115 aaKnown RBP21.58■■□□□ 1.04
DDX55-205ENST00000538744 PSMC1P62191 440 aaKnown RBP21.58■■□□□ 1.04
DDX55-205ENST00000538744 ZNF252P-AS1Q0IIN9 211 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 DDX42Q86XP3 938 aaKnown RBP eCLIP21.58■■□□□ 1.04
DDX55-205ENST00000538744 JAMLQ86YT9 394 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 REM2Q8IYK8 340 aaPredicted RBP21.58■■□□□ 1.04
DDX55-205ENST00000538744 MREGQ8N565 214 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 NIPA2Q8N8Q9 360 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 SMG8Q8ND04 991 aaKnown RBP21.58■■□□□ 1.04
DDX55-205ENST00000538744 ZNF560Q96MR9 790 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 CPXM1Q96SM3 734 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 ERP44Q9BS26 406 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 RNF39Q9H2S5 420 aa21.58■■□□□ 1.04
DDX55-205ENST00000538744 GOLGA6BA6NDN3 693 aa21.57■■□□□ 1.04
DDX55-205ENST00000538744 GOLGA8SH3BPF8 625 aa21.57■■□□□ 1.04
DDX55-205ENST00000538744 ECHS1P30084 290 aa21.57■■□□□ 1.04
DDX55-205ENST00000538744 PTGIRP43119 386 aa21.57■■□□□ 1.04
DDX55-205ENST00000538744 FNTAP49354 379 aa21.57■■□□□ 1.04
DDX55-205ENST00000538744 SP3Q02447 781 aa21.57■■□□□ 1.04
DDX55-205ENST00000538744 ZNF268Q14587 947 aaPredicted RBP21.57■■□□□ 1.04
DDX55-205ENST00000538744 CCDC137Q6PK04 289 aaKnown RBP21.57■■□□□ 1.04
DDX55-205ENST00000538744 LCLAT1Q6UWP7 414 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms