RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 WLSQ5T9L3 541 aa12.63□□□□□ -0.39
CPNE8-203ENST00000538596 TRABD2AQ86V40 505 aa12.63□□□□□ -0.39
CPNE8-203ENST00000538596 RELL1Q8IUW5 271 aa12.63□□□□□ -0.39
CPNE8-203ENST00000538596 UBR7Q8N806 425 aa12.63□□□□□ -0.39
CPNE8-203ENST00000538596 PRPF31Q8WWY3 499 aaKnown RBP12.63□□□□□ -0.39
CPNE8-203ENST00000538596 PITPNM3Q9BZ71 974 aa12.63□□□□□ -0.39
CPNE8-203ENST00000538596 ZWILCHQ9H900 591 aa12.63□□□□□ -0.39
CPNE8-203ENST00000538596 hCG_1818297A0A087WSY0 165 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 A0A1W2PPM1 405 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 SGK1O00141 431 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 LDHAP00338 332 aaKnown RBP12.62□□□□□ -0.39
CPNE8-203ENST00000538596 GDF10P55107 478 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 EFTUD2Q15029 972 aaKnown RBP eCLIP12.62□□□□□ -0.39
CPNE8-203ENST00000538596 STXBP2Q15833 593 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 ZBTB10Q96DT7 871 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 RBM41Q96IZ5 413 aaKnown RBP12.62□□□□□ -0.39
CPNE8-203ENST00000538596 IMPG2Q9BZV3 1241 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
CPNE8-203ENST00000538596 FAM189A1O60320 539 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 ATG7O95352 703 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 KRT15P19012 456 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 UBA1P22314 1058 aaKnown RBP12.62□□□□□ -0.39
CPNE8-203ENST00000538596 RPA3P35244 121 aaPredicted RBP12.62□□□□□ -0.39
CPNE8-203ENST00000538596 RAP1GAPP47736 663 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 NRLP54845 237 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 MTFR1Q15390 333 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 OASLQ15646 514 aaKnown RBP12.62□□□□□ -0.39
CPNE8-203ENST00000538596 CATSPERGQ6ZRH7 1159 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 KLHL29Q96CT2 875 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 STAMBPL1Q96FJ0 436 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 CFAP57Q96MR6 1250 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 TRABDQ9H4I3 376 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 MCM8Q9UJA3 840 aa12.62□□□□□ -0.39
CPNE8-203ENST00000538596 ADCY3O60266 1144 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 ASMTLO95671 621 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 GJB1P08034 283 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 RFC1P35251 1148 aaPredicted RBP12.61□□□□□ -0.39
CPNE8-203ENST00000538596 CETN2P41208 172 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 CDKN2BP42772 138 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 OAZ1P54368 228 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 TFAMQ00059 246 aaKnown RBP12.61□□□□□ -0.39
CPNE8-203ENST00000538596 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
CPNE8-203ENST00000538596 RNASEH2BQ5TBB1 312 aaKnown RBP12.61□□□□□ -0.39
CPNE8-203ENST00000538596 ANKRD22Q5VYY1 191 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 DLK2Q6UY11 383 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 TRIM50Q86XT4 487 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 KIAA0319LQ8IZA0 1049 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 ANKRD35Q8N283 1001 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 LRRC71Q8N4P6 559 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 R3HDMLQ9H3Y0 253 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 AS3MTQ9HBK9 375 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 RXFP1Q9HBX9 757 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 DOCK1Q14185 1865 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 NFKBIEO00221 500 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 CD48P09326 243 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 IL1R2P27930 398 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 VCPP55072 806 aaKnown RBP12.61□□□□□ -0.39
CPNE8-203ENST00000538596 MSS51Q4VC12 460 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 TFDP3Q5H9I0 405 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 ANGEL2Q5VTE6 544 aaKnown RBP12.61□□□□□ -0.39
CPNE8-203ENST00000538596 BRSK2Q8IWQ3 736 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 ARFGAP1Q8N6T3 406 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 CEP120Q8N960 986 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 JOSD2Q8TAC2 188 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 AGAP11Q8TF27 550 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 C12orf65Q9H3J6 166 aaKnown RBP12.61□□□□□ -0.39
CPNE8-203ENST00000538596 YY1AP1Q9H869 796 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 KLHL14Q9P2G3 628 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
CPNE8-203ENST00000538596 CYTH4Q9UIA0 394 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 POLIQ9UNA4 740 aa12.61□□□□□ -0.39
CPNE8-203ENST00000538596 CFAP73A6NFT4 308 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 MSCO60682 206 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 CALB1P05937 261 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 RPSAP08865 295 aaKnown RBP12.6□□□□□ -0.39
CPNE8-203ENST00000538596 ABHD2P08910 425 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 FGFR1P11362 822 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 IL9RQ01113 521 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 LMNB2Q03252 620 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 SLC1A5Q15758 541 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 PPP1R15BQ5SWA1 713 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 DENND1BQ6P3S1 775 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 PPP1R21Q6ZMI0 780 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 ERICH1Q86X53 443 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 THNSL1Q8IYQ7 743 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 EMC1Q8N766 993 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 NIFKQ9BYG3 293 aaKnown RBP12.6□□□□□ -0.39
CPNE8-203ENST00000538596 VPS33BQ9H267 617 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 PIM2Q9P1W9 311 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 LOC102724159A0A0B4J2E5 919 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 FARP2O94887 1054 aaPredicted RBP12.6□□□□□ -0.39
CPNE8-203ENST00000538596 SSTR1P30872 391 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 GPX6P59796 221 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 ZNF268Q14587 947 aaPredicted RBP12.6□□□□□ -0.39
CPNE8-203ENST00000538596 PWP2Q15269 919 aaKnown RBP12.6□□□□□ -0.39
CPNE8-203ENST00000538596 PTPN20Q4JDL3 420 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 SYCP2LQ5T4T6 812 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms