RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 ITGB1P05556 798 aa20.73■□□□□ 0.91
EFCAB11-202ENST00000538485 VDRP11473 427 aa20.73■□□□□ 0.91
EFCAB11-202ENST00000538485 NAP1L1P55209 391 aaKnown RBP20.73■□□□□ 0.91
EFCAB11-202ENST00000538485 RNASELQ05823 741 aaKnown RBP20.73■□□□□ 0.91
EFCAB11-202ENST00000538485 WSCD1Q658N2 575 aa20.73■□□□□ 0.91
EFCAB11-202ENST00000538485 COLGALT2Q8IYK4 626 aa20.73■□□□□ 0.91
EFCAB11-202ENST00000538485 DPEP3Q9H4B8 488 aa20.73■□□□□ 0.91
EFCAB11-202ENST00000538485 DNAJB4Q9UDY4 337 aa20.73■□□□□ 0.91
EFCAB11-202ENST00000538485 I3L4J1 428 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 MED7O43513 233 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 PDGFRBP09619 1106 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 NSFP46459 744 aaKnown RBP20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 SGO2Q562F6 1265 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 MFSD5Q6N075 450 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 DSTYKQ6XUX3 929 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 OSTM1Q86WC4 334 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 WDTC1Q8N5D0 677 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 NOX5Q96PH1 765 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 OSGEPQ9NPF4 335 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 KIAA1257Q9ULG3 409 aa20.72■□□□□ 0.91
EFCAB11-202ENST00000538485 A0A0A6YYK5 440 aaPredicted RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 O00370 1275 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 GABRDO14764 452 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 KIF4AO95239 1232 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 WARSP23381 471 aaKnown RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 BRCC3P46736 316 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 GPC5P78333 572 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 C2CD6Q53TS8 623 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 DCLRE1AQ6PJP8 1040 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 NPAS4Q8IUM7 802 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 TRIM58Q8NG06 486 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 SLC35G2Q8TBE7 412 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 RFFLQ8WZ73 363 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 SNX25Q9H3E2 840 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 CHORDC1Q9UHD1 332 aaPredicted RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 TIMM13Q9Y5L4 95 aaPredicted RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 NCANO14594 1321 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 ATMINO43313 823 aaPredicted RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 LSM8O95777 96 aaKnown RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 CASQ1P31415 396 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 CDH5P33151 784 aaPredicted RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 NOP2P46087 812 aaKnown RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 CNGA2Q16280 664 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 DENND1BQ6P3S1 775 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 MCOLN2Q8IZK6 566 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 CRYBG2Q8N1P7 616 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 C1orf131Q8NDD1 294 aaKnown RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 FAM193BQ96PV7 902 aaPredicted RBP20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 LPIN3Q9BQK8 851 aa20.71■□□□□ 0.91
EFCAB11-202ENST00000538485 HOXA2O43364 376 aa20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 UPP2O95045 317 aa20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 FAM163BP0C2L3 166 aa20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 PPP1R26Q5T8A7 1209 aaPredicted RBP20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 MON1BQ7L1V2 547 aa20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 PHF13Q86YI8 300 aaPredicted RBP20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 TMEM35BQ8NCS4 154 aa20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 LHX5Q9H2C1 402 aa20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 COG5Q9UP83 839 aa20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 PCDHGC5Q9Y5F6 944 aa20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 FNDC1Q4ZHG4 1894 aaPredicted RBP20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 ALPK3Q96L96 1907 aa20.7■□□□□ 0.9
EFCAB11-202ENST00000538485 LTBP2Q14767 1821 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 MICAL2O94851 1124 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 OR1G1P47890 313 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 TMEM86AQ8N2M4 240 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 TMEM199Q8N511 208 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 RSPH1Q8WYR4 309 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 ZNF653Q96CK0 615 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 ZNF518BQ9C0D4 1074 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 NRDE2Q9H7Z3 1164 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 FAM49BQ9NUQ9 324 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 HCSTQ9UBK5 93 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 GTF3C4Q9UKN8 822 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 TSPAN16Q9UKR8 245 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 ABHD14A-ACY1A0A1B0GW23 586 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 M0QZQ0 153 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 ENC1O14682 589 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 ACRP10323 421 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 MMP8P22894 467 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 LCLAT1Q6UWP7 414 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 ALS2CR12Q96Q35 445 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 C11orf70Q9BRQ4 267 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 RNF216Q9NWF9 866 aaPredicted RBP20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 DDX43Q9NXZ2 648 aaKnown RBP20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 ADAM22Q9P0K1 906 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 CYTH4Q9UIA0 394 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 PRG3Q9Y2Y8 225 aaPredicted RBP20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 CEP83Q9Y592 693 aa20.69■□□□□ 0.9
EFCAB11-202ENST00000538485 GRID2IPA4D2P6 1211 aa20.68■□□□□ 0.9
EFCAB11-202ENST00000538485 TBKBP1A7MCY6 615 aa20.68■□□□□ 0.9
EFCAB11-202ENST00000538485 M0QYV0 167 aa20.68■□□□□ 0.9
EFCAB11-202ENST00000538485 PALMO75781 387 aa20.68■□□□□ 0.9
EFCAB11-202ENST00000538485 CYP1A2P05177 515 aa20.68■□□□□ 0.9
EFCAB11-202ENST00000538485 ACAT1P24752 427 aaKnown RBP20.68■□□□□ 0.9
EFCAB11-202ENST00000538485 GPD2P43304 727 aa20.68■□□□□ 0.9
EFCAB11-202ENST00000538485 PTP4A2Q12974 167 aa20.68■□□□□ 0.9
EFCAB11-202ENST00000538485 MMS22LQ6ZRQ5 1243 aa20.68■□□□□ 0.9
EFCAB11-202ENST00000538485 CNOT8Q9UFF9 292 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms