RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 GJA10Q969M2 543 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 ASIC4Q96FT7 647 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 CDK5RAP3Q96JB5 506 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 CCDC43Q96MW1 224 aaKnown RBP4.79□□□□□ -1.64
SNHG1-208ENST00000538266 USP28Q96RU2 1077 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 PPP1R9BQ96SB3 815 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 DNAJC7Q99615 494 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 GPR20Q99678 358 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 MTG1Q9BT17 334 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SPATA9Q9BWV2 254 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 FTOQ9C0B1 505 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SCAND2PQ9GZW5 306 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-208ENST00000538266 TMEM60Q9H2L4 133 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 UNC45AQ9H3U1 944 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SMARCAD1Q9H4L7 1026 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 STARD7Q9NQZ5 370 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 ZNF302Q9NR11 478 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 SNTG2Q9NY99 539 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 ERAP1Q9NZ08 941 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 GPR160Q9UJ42 338 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 PCDHA10Q9Y5I2 948 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 CLIC4Q9Y696 253 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 CEP350Q5VT06 3117 aa4.79□□□□□ -1.64
SNHG1-208ENST00000538266 MROH7Q68CQ1 1323 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 EMSYQ7Z589 1322 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 KDM3AQ9Y4C1 1321 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 A0A0U1RQG5 324 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 SPTLC2O15270 562 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 CTAGE5O15320 804 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 EDIL3O43854 480 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 YEATS4O95619 227 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 CPP00450 1065 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 F2P00734 622 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 CAPNS1P04632 268 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 THBDP07204 575 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 GLI1P08151 1106 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 EN2P19622 333 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 MSNP26038 577 aaKnown RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 MARK3P27448 753 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 MARCKSP29966 332 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 LONP1P36776 959 aaKnown RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 CCT6AP40227 531 aaKnown RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 UBA7P41226 1012 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 GALK1P51570 392 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 STAT5BP51692 787 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 TERF1P54274 439 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 PSMC5P62195 406 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 PRKCEQ02156 737 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 CYP4A11Q02928 519 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 BMS1Q14692 1282 aaKnown RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 SLC39A14Q15043 492 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 ZRSR1Q15695 479 aaKnown RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 KIAA0753Q2KHM9 967 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 HSF5Q4G112 596 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 TIGD5Q53EQ6 642 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 HS1BP3Q53T59 392 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 FAM47CQ5HY64 1035 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 KRT79Q5XKE5 535 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 SWSAP1Q6NVH7 229 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 TRMT1LQ7Z2T5 733 aaKnown RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 SLCO6A1Q86UG4 719 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 CCDC60Q8IWA6 550 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 TPH2Q8IWU9 490 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 C7orf31Q8N865 590 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 KLHDC9Q8NEP7 349 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 NEK9Q8TD19 979 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 FAM167AQ96KS9 214 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 AK8Q96MA6 479 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 MTMR9Q96QG7 549 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 JMJD8Q96S16 334 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 LXNQ9BS40 222 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 C16orf70Q9BSU1 422 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 AARSD1Q9BTE6 412 aaKnown RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 IER2Q9BTL4 223 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 SENP6Q9GZR1 1112 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-208ENST00000538266 C11orf49Q9H6J7 331 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 BCAS3Q9H6U6 928 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 CLEC1BQ9P126 229 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 GABBR1Q9UBS5 961 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 LRWD1Q9UFC0 647 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 ZDHHC9Q9Y397 364 aa4.78□□□□□ -1.64
SNHG1-208ENST00000538266 IGSF9BQ9UPX0 1349 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 TRBV23OR9-2A0A075B6M9 112 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 TRAV20A0A0B4J274 112 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 GSTTP1A0A1W2PQM5 241 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 PRODHO43272 600 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 CUTAO60888 179 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 PPP6R2O75170 966 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 SCG5P05408 212 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 GNAT1P11488 350 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 PRKCAP17252 672 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 YWHABP31946 246 aaKnown RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 L1CAMP32004 1257 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 QARSP47897 775 aaKnown RBP4.77□□□□□ -1.65
SNHG1-208ENST00000538266 PSMC6P62333 389 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 CYP4F3Q08477 520 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 SPIRE1Q08AE8 756 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 PPFIA1Q13136 1202 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 LAPTM5Q13571 262 aa4.77□□□□□ -1.65
SNHG1-208ENST00000538266 ITGA7Q13683 1181 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms