RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 TRIM67Q6ZTA4 783 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 SV2AQ7L0J3 742 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 GET4Q7L5D6 327 aaPredicted RBP9.03□□□□□ -0.96
SPARC-208ENST00000538026 USP37Q86T82 979 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 ADSSL1Q8N142 457 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 SLC44A3Q8N4M1 653 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 TOP6BLQ8N6T0 577 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 STKLD1Q8NE28 680 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 GOLGA5Q8TBA6 731 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 ING5Q8WYH8 240 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 ANKRD36BP1Q96IX9 119 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 GSDMAQ96QA5 445 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 MED15Q96RN5 788 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 CORO1BQ9BR76 489 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 MKNK1Q9BUB5 465 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 OXCT2Q9BYC2 517 aaPredicted RBP9.03□□□□□ -0.96
SPARC-208ENST00000538026 PLA2G2FQ9BZM2 168 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 IL21Q9HBE4 155 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 CRTAC1Q9NQ79 661 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 TMEM30AQ9NV96 361 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 DSEQ9UL01 958 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 CDH7Q9ULB5 785 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 DMXL1Q9Y485 3027 aa9.03□□□□□ -0.96
SPARC-208ENST00000538026 KMT2EQ8IZD2 1858 aa9.02□□□□□ -0.96
SPARC-208ENST00000538026 TMEM221A6NGB7 291 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 M0R296 226 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 XYLBO75191 536 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 PRPF40AO75400 957 aaKnown RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 STAU1O95793 577 aaKnown RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 TNNC2P02585 160 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 TRIM49P0CI25 452 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 TRIM49CP0CI26 452 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 HMGA1P17096 107 aaKnown RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 PTPN2P17706 415 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 FCARP24071 287 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 NR2F2P24468 414 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 GBP2P32456 591 aaPredicted RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 ELF1P32519 619 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 PNPLA4P41247 253 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 MORC3Q14149 939 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 ZACNQ401N2 412 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 PABPC1LQ4VXU2 614 aaKnown RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 TMEM31Q5JXX7 168 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 SDHAF4Q5VUM1 108 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 CEP135Q66GS9 1140 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 SPOPLQ6IQ16 392 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 GAREM2Q75VX8 874 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 DNAJB7Q7Z6W7 309 aaPredicted RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 TMEM150AQ86TG1 271 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 ADGRF2Q8IZF7 708 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 SHKBP1Q8TBC3 707 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 GPR152Q8TDT2 470 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 SEMA4DQ92854 862 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 ACSF2Q96CM8 615 aaPredicted RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 RSPRY1Q96DX4 576 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 ZNF560Q96MR9 790 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 LRRC3BQ96PB8 259 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 FNBP1Q96RU3 617 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 DUSP9Q99956 384 aaKnown RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 ACBD6Q9BR61 282 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 C1QTNF1Q9BXJ1 281 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 DPEP3Q9H4B8 488 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 SMYD3Q9H7B4 428 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 VRTNQ9H8Y1 702 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 APOBEC3GQ9HC16 384 aaKnown RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 DDX43Q9NXZ2 648 aaKnown RBP9.02□□□□□ -0.97
SPARC-208ENST00000538026 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPARC-208ENST00000538026 GTF3C4Q9UKN8 822 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 MAFFQ9ULX9 164 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 SORCS3Q9UPU3 1222 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 NUMBLQ9Y6R0 609 aa9.02□□□□□ -0.97
SPARC-208ENST00000538026 MYH10P35580 1976 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 ZFHX2Q9C0A1 2572 aaPredicted RBP9.01□□□□□ -0.97
SPARC-208ENST00000538026 GOLGA6L4A6NEF3 574 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 SHISA7A6NL88 538 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 PRR33A8MZF0 331 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 MAPK13O15264 365 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 CALUO43852 315 aaPredicted RBP9.01□□□□□ -0.97
SPARC-208ENST00000538026 HUS1O60921 280 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 LRG1P02750 347 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 PDGFRBP09619 1106 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 HAPLN1P10915 354 aaPredicted RBP9.01□□□□□ -0.97
SPARC-208ENST00000538026 NPR3P17342 541 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 WARSP23381 471 aaKnown RBP9.01□□□□□ -0.97
SPARC-208ENST00000538026 CYP2F1P24903 491 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 RAP1GAPP47736 663 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 CACNA2D1P54289 1103 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 PSMC1P62191 440 aaKnown RBP9.01□□□□□ -0.97
SPARC-208ENST00000538026 SIGLEC14Q08ET2 396 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 ADAM9Q13443 819 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 TDGQ13569 410 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 MTMR3Q13615 1198 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 NCOA4Q13772 614 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 EDRF1Q3B7T1 1238 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 INTS6LQ5JSJ4 861 aaKnown RBP9.01□□□□□ -0.97
SPARC-208ENST00000538026 STXBP5Q5T5C0 1151 aa9.01□□□□□ -0.97
SPARC-208ENST00000538026 RIF1Q5UIP0 2472 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms