RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 SLC35G2Q8TBE7 412 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 KLHL32Q96NJ5 620 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 EYA1Q99502 592 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 MLPHQ9BV36 600 aaPredicted RBP5.9□□□□□ -1.46
CSMD1-215ENST00000537824 KRT84Q9NSB2 600 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 CYP39A1Q9NYL5 469 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 RAB21Q9UL25 225 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 IL31Q6EBC2 164 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 BORCS5Q969J3 196 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 ERLEC1Q96DZ1 483 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 WNK4Q96J92 1243 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 ATXN2Q99700 1313 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 CCDC182A6NF36 153 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 OPLAHO14841 1288 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 PSMG1O95456 288 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 APRTP07741 180 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 WEE2P0C1S8 567 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 CYP4A22Q5TCH4 519 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 GLYCTKQ8IVS8 523 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 RBM46Q8TBY0 533 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 OTUB1Q96FW1 271 aaPredicted RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 RBBP8Q99708 897 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 SENP7Q9BQF6 1050 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 SARS2Q9NP81 518 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 IP6K2Q9UHH9 426 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 SERPINB13Q9UIV8 391 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 SPEF2Q9C093 1822 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 FEN1P39748 380 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 TAF2Q6P1X5 1199 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 FBXO11Q86XK2 927 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 ATXN2LQ8WWM7 1075 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 SEPT1Q8WYJ6 367 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 FAM118BQ9BPY3 351 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 ECSITQ9BQ95 431 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 INTS2Q9H0H0 1204 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 RSL24D1Q9UHA3 163 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 SRP68Q9UHB9 627 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 WBP11Q9Y2W2 641 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 A8MXQ7 604 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 FLT3P36888 993 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 TUFMP49411 452 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 EZH2Q15910 746 aaKnown RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 FGD2Q7Z6J4 655 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 BTN2A2Q8WVV5 523 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 NFKBIL1Q9UBC1 381 aaPredicted RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 SPDYE5A6NIY4 337 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 BCAR1P56945 870 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 PGBD4Q96DM1 585 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF624Q9P2J8 865 aaPredicted RBP5.9□□□□□ -1.47
CSMD1-215ENST00000537824 CEP152O94986 1710 aa5.9□□□□□ -1.47
CSMD1-215ENST00000537824 NBASA2RRP1 2371 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 PRPF3O43395 683 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CNOT3O75175 753 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SERPINB9P50453 376 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SPDYAQ5MJ70 313 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CENPPQ6IPU0 288 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 RORBQ92753 470 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 NACC1Q96RE7 527 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 URB2Q14146 1524 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CLASP1Q7Z460 1538 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 MYO1DO94832 1006 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 FCGR1AP12314 374 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 RFC4P35249 363 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 BCAMP50895 628 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 AQP5P55064 265 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 PRR23CQ6ZRP0 262 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 C16orf62Q7Z3J2 963 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 UNC45BQ8IWX7 931 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 RCOR2Q8IZ40 523 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ADSSL1Q8N142 457 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ACSBG1Q96GR2 724 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ZFYVE1Q9HBF4 777 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 GPBP1L1Q9HC44 474 aaPredicted RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SLC9A2Q9UBY0 812 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SEPT9Q9UHD8 586 aaPredicted RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CYP2D7A0A087X1C5 515 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 MED26O95402 600 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ACTR2P61160 394 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 MROH9Q5TGP6 573 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ANKRD40Q6AI12 368 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CENPLQ8N0S6 344 aaPredicted RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 USP38Q8NB14 1042 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 AENQ8WTP8 325 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 PUS7LQ9H0K6 701 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ELOVL6Q9H5J4 265 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 GGA2Q9UJY4 613 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CACNA1HO95180 2353 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 PLB1Q6P1J6 1458 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 FAM95CA0A1B0GW59 222 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 TSPAN4O14817 238 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 PLEKHA8P1O95397 391 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 TCF3P15923 654 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 HIBADHP31937 336 aaKnown RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 IFNA8P32881 189 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 ZSWIM7Q19AV6 140 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 CCDC153Q494R4 210 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 TRIM45Q9H8W5 580 aaPredicted RBP5.89□□□□□ -1.47
CSMD1-215ENST00000537824 EHD3Q9NZN3 535 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 SPEF1Q9Y4P9 236 aa5.89□□□□□ -1.47
CSMD1-215ENST00000537824 DUSP10Q9Y6W6 482 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms