RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 PSEN2P49810 448 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 PLTPP55058 493 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 ZFYVE27Q5T4F4 411 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.49■□□□□ 0.55
SNX17-210ENST00000537606 RNF25Q96BH1 459 aaPredicted RBP18.49■□□□□ 0.55
SNX17-210ENST00000537606 ACSF2Q96CM8 615 aaPredicted RBP18.49■□□□□ 0.55
SNX17-210ENST00000537606 ATP8A1Q9Y2Q0 1164 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 CITO14578 2027 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 TCRBV5S1A1TA0A578 114 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 PI4K2BG5E9Z4 385 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 FSCN2O14926 492 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 CILPO75339 1184 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 RALAP11233 206 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 GRM5P41594 1212 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 CRHR2Q13324 411 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 SGO2Q562F6 1265 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 CD302Q8IX05 232 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 RHOT1Q8IXI2 618 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 LRRC45Q96CN5 670 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 TMEM176AQ96HP8 235 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 HEXIM2Q96MH2 286 aaKnown RBP18.49■□□□□ 0.55
SNX17-210ENST00000537606 NXF3Q9H4D5 531 aaKnown RBP18.49■□□□□ 0.55
SNX17-210ENST00000537606 CALCOCO1Q9P1Z2 691 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 PCYOX1Q9UHG3 505 aa18.49■□□□□ 0.55
SNX17-210ENST00000537606 FAM187AA6NFU0 413 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 IRAK1P51617 712 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 RBP5P82980 135 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 PTPN11Q06124 597 aaPredicted RBP18.48■□□□□ 0.55
SNX17-210ENST00000537606 UBA3Q8TBC4 463 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 FBXO25Q8TCJ0 367 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 C18orf25Q96B23 403 aaPredicted RBP18.48■□□□□ 0.55
SNX17-210ENST00000537606 FMO2Q99518 471 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 PLVAPQ9BX97 442 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 CAPS2Q9BXY5 557 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 AP5M1Q9H0R1 490 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 ZDHHC18Q9NUE0 388 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 TUBGCP4Q9UGJ1 667 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 IP6K2Q9UHH9 426 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 R3HDM2Q9Y2K5 976 aaKnown RBP18.48■□□□□ 0.55
SNX17-210ENST00000537606 SMIM35A0A1B0GVV1 85 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 MBLAC1A4D2B0 266 aaPredicted RBP18.48■□□□□ 0.55
SNX17-210ENST00000537606 PIK3R2O00459 728 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 DARSP14868 501 aaKnown RBP18.48■□□□□ 0.55
SNX17-210ENST00000537606 ATICP31939 592 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 CDH5P33151 784 aaPredicted RBP18.48■□□□□ 0.55
SNX17-210ENST00000537606 RGS2P41220 211 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 RPL21P46778 160 aaKnown RBP18.48■□□□□ 0.55
SNX17-210ENST00000537606 NDST1P52848 882 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 GNGT1P63211 74 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 ZNF844Q08AG5 666 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 PDCLQ13371 301 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 CYP1B1Q16678 543 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 KYAT1Q16773 422 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 TXNRD3NBQ6F5E7 133 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 SLC27A1Q6PCB7 646 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 CPXM1Q96SM3 734 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 ZNF518BQ9C0D4 1074 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 KLK14Q9P0G3 267 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 C2CD2Q9Y426 696 aa18.48■□□□□ 0.55
SNX17-210ENST00000537606 MYADML2A6NDP7 307 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 SHOX2O60902 331 aaPredicted RBP18.47■□□□□ 0.55
SNX17-210ENST00000537606 UBAP2Q5T6F2 1119 aaKnown RBP18.47■□□□□ 0.55
SNX17-210ENST00000537606 ZDHHC24Q6UX98 284 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 TRIM6Q9C030 488 aaPredicted RBP18.47■□□□□ 0.55
SNX17-210ENST00000537606 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNX17-210ENST00000537606 RASAL2Q9UJF2 1139 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 ITGA11Q9UKX5 1188 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 PIN4Q9Y237 131 aaKnown RBP18.47■□□□□ 0.55
SNX17-210ENST00000537606 MED7O43513 233 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 MICAL2O94851 1124 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 RFC1P35251 1148 aaPredicted RBP18.47■□□□□ 0.55
SNX17-210ENST00000537606 CPT1AP50416 773 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 ADAM17P78536 824 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 PPP1R2P3Q6NXS1 205 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 C12orf29Q8N999 325 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 JOSD2Q8TAC2 188 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 ATP6V1G3Q96LB4 118 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 SYNCQ9H7C4 482 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 GRHL1Q9NZI5 618 aa18.47■□□□□ 0.55
SNX17-210ENST00000537606 M0QYV0 167 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 PSTPIP1O43586 416 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 PAEPP09466 180 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 KRT10P13645 584 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 ADCY2Q08462 1091 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 TRIP13Q15645 432 aaPredicted RBP18.46■□□□□ 0.55
SNX17-210ENST00000537606 DCAF4L1Q3SXM0 396 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 KAZNQ674X7 775 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 NOTUMQ6P988 496 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 EMC1Q8N766 993 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 ARHGAP39Q9C0H5 1083 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 TMBIM4Q9HC24 238 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 ZFYVE28Q9HCC9 887 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 BCCIPQ9P287 314 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNX17-210ENST00000537606 SNX9Q9Y5X1 595 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 SCN1AP35498 2009 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 GRIN2DO15399 1336 aa18.46■□□□□ 0.55
SNX17-210ENST00000537606 RPS6KA5O75582 802 aa18.45■□□□□ 0.54
SNX17-210ENST00000537606 ERBB2P04626 1255 aa18.45■□□□□ 0.54
SNX17-210ENST00000537606 P4HA1P13674 534 aa18.45■□□□□ 0.54
SNX17-210ENST00000537606 HPDP32754 393 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms