RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	TCEAL4	Q96EI5	215 aa		11.65	□□□□□ -0.55
LDHA-215	ENST00000537296	GSDMA	Q96QA5	445 aa		11.65	□□□□□ -0.55
LDHA-215	ENST00000537296	CORO1B	Q9BR76	489 aa		11.65	□□□□□ -0.55
LDHA-215	ENST00000537296	LRFN3	Q9BTN0	628 aa		11.65	□□□□□ -0.55
LDHA-215	ENST00000537296	DNAJC25	Q9H1X3	360 aa		11.65	□□□□□ -0.55
LDHA-215	ENST00000537296	KCNK12	Q9HB15	430 aa		11.65	□□□□□ -0.55
LDHA-215	ENST00000537296	DSE	Q9UL01	958 aa		11.65	□□□□□ -0.55
LDHA-215	ENST00000537296	NME7	Q9Y5B8	376 aa		11.65	□□□□□ -0.55
LDHA-215	ENST00000537296	PTPRD	P23468	1912 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	TRIM49B	A6NDI0	452 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	CALU	O43852	315 aa	Predicted RBP	11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	HUS1	O60921	280 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	ATP2C2	O75185	946 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	POU2F2	P09086	479 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	LAMP2	P13473	410 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	GJA1	P17302	382 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	BMP6	P22004	513 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	LMO2	P25791	158 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	CLDN10	P78369	228 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	LIMS2	Q7Z4I7	341 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	NPAS3	Q8IXF0	933 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	ADGRF2	Q8IZF7	708 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	FGF13	Q92913	245 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	LPIN3	Q9BQK8	851 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	RPP25	Q9BUL9	199 aa	Known RBP	11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	C1QTNF1	Q9BXJ1	281 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	XYLT2	Q9H1B5	865 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	DDX43	Q9NXZ2	648 aa	Known RBP	11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	EPS15L1	Q9UBC2	864 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	MAN1B1	Q9UKM7	699 aa		11.64	□□□□□ -0.55
LDHA-215	ENST00000537296	BIN1	O00499	593 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	GABRD	O14764	452 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	NARS	O43776	548 aa	Known RBP	11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	KIN	O60870	393 aa	Known RBP	11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	GPR37L1	O60883	481 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	LRRN2	O75325	713 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	PRPF40A	O75400	957 aa	Known RBP	11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	MOSPD3	O75425	235 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	C4BPA	P04003	597 aa	Known RBP	11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	TRIM49	P0CI25	452 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	TRIM49C	P0CI26	452 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	CEBPB	P17676	345 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	ATF6	P18850	670 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	GPR15	P49685	360 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	MYO1E	Q12965	1108 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	TMEM31	Q5JXX7	168 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	PRSS36	Q5K4E3	855 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	TRIM67	Q6ZTA4	783 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	HFE2	Q6ZVN8	426 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	THEM5	Q8N1Q8	247 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	TOP6BL	Q8N6T0	577 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	GPR152	Q8TDT2	470 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	FGF14	Q92915	247 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	ASIC4	Q96FT7	647 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	PKMYT1	Q99640	499 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	SEPT5	Q99719	369 aa	Predicted RBP	11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	MRPL45	Q9BRJ2	306 aa	Known RBP	11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	LRRC3	Q9BY71	257 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.63	□□□□□ -0.55	1e-9	■■■□□ 16.9
LDHA-215	ENST00000537296	RMND1	Q9NWS8	449 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	ABI2	Q9NYB9	513 aa	Predicted RBP	11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	SORCS3	Q9UPU3	1222 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	COL4A3	Q01955	1670 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	OBSL1	O75147	1896 aa		11.63	□□□□□ -0.55
LDHA-215	ENST00000537296	DENND4C	Q5VZ89	1909 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	MYBPHL	A2RUH7	354 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	KIF20A	O95235	890 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	SMC2	O95347	1197 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	PDGFB	P01127	241 aa	Predicted RBP	11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	PTPN2	P17706	415 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	VAMP7	P51809	220 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	PSMC1	P62191	440 aa	Known RBP	11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	PPP3CA	Q08209	521 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	ADAM9	Q13443	819 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	BIRC3	Q13489	604 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	NFIL3	Q16649	462 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	WDR72	Q3MJ13	1102 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	INTS6L	Q5JSJ4	861 aa	Known RBP	11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	ANKRD40	Q6AI12	368 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	PARM1	Q6UWI2	310 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	RTL10	Q7L3V2	364 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	TMC8	Q8IU68	726 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	ADSSL1	Q8N142	457 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	MCRS1	Q96EZ8	462 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	CCDC34	Q96HJ3	373 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	MMS19	Q96T76	1030 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	PI4K2A	Q9BTU6	479 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	GTF3C4	Q9UKN8	822 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	CDH7	Q9ULB5	785 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	FRMD4B	Q9Y2L6	1034 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	MRPS23	Q9Y3D9	190 aa	Known RBP	11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	GREB1	Q4ZG55	1949 aa		11.62	□□□□□ -0.55
LDHA-215	ENST00000537296	TMEM221	A6NGB7	291 aa		11.61	□□□□□ -0.55
LDHA-215	ENST00000537296	ANHX	E9PGG2	379 aa		11.61	□□□□□ -0.55
LDHA-215	ENST00000537296		M0R296	226 aa		11.61	□□□□□ -0.55
LDHA-215	ENST00000537296	PHACTR2	O75167	634 aa		11.61	□□□□□ -0.55

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