RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TASP1Q9H6P5 420 aa21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 KIF26AQ9ULI4 1882 aaPredicted RBP21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 TULP1O00294 542 aaPredicted RBP21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 GCNT3O95395 438 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 TDGF1P13385 188 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SYT1P21579 422 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 WEE1P30291 646 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 PNPLA4P41247 253 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SOX9P48436 509 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CYP4F8P98187 520 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 RESTQ13127 1097 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 PUM1Q14671 1186 aaKnown RBP eCLIP21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 FAM173BQ6P4H8 233 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 DGLUCYQ7Z3D6 616 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 LRRTM3Q86VH5 581 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 GPR161Q8N6U8 529 aaKnown RBP21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 LRRC3BQ96PB8 259 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 FAM213AQ9BRX8 229 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 IL21Q9HBE4 155 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 ABI2Q9NYB9 513 aaPredicted RBP21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 PCDHB13Q9Y5F0 798 aa21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 NUP210Q8TEM1 1887 aaPredicted RBP21.22■□□□□ 0.99
TNFRSF1B-204ENST00000536782 DENND4CQ5VZ89 1909 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 MYBPHLA2RUH7 354 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SPECC1L-ADORA2AF8WAN1 911 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 LDHAP00338 332 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 HAPLN1P10915 354 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 IDEP14735 1019 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CXCL12P48061 93 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 TFAMQ00059 246 aaKnown RBP21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CCDC73Q6ZRK6 1079 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 RALGPS2Q86X27 583 aaPredicted RBP21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 BRSK2Q8IWQ3 736 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SYCP3Q8IZU3 236 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 BPIFB1Q8TDL5 484 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 GIPC2Q8TF65 315 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SAAL1Q96ER3 474 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 ZFYVE19Q96K21 471 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 OLFML3Q9NRN5 406 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 GTSE1Q9NYZ3 720 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 PCDHB5Q9Y5E4 795 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 RALGAPA1Q6GYQ0 2036 aa21.21■□□□□ 0.99
TNFRSF1B-204ENST00000536782 MED19A0JLT2 244 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PRAMEF12O95522 483 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 GARTP22102 1010 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 STAT6P42226 847 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PLCB2Q00722 1185 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TSPY1Q01534 308 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ALCAMQ13740 583 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 DGKKQ5KSL6 1271 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SPEM1Q8N4L4 309 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TTC8Q8TAM2 541 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CACTINQ8WUQ7 758 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 THG1LQ9NWX6 298 aaKnown RBP21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ZMYM5Q9UJ78 669 aa21.2■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ITGB3P05106 788 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 POLR2BP30876 1174 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CTHP32929 405 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CASP5P51878 434 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 WNT7BP56706 349 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SATB1Q01826 763 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 GAS6Q14393 721 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TXNDC11Q6PKC3 985 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CELF5Q8N6W0 485 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ZSWIM2Q8NEG5 633 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SLC46A2Q9BY10 475 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PANK2Q9BZ23 570 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 RBM12Q9NTZ6 932 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 DLL3Q9NYJ7 618 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 RBAKQ9NYW8 714 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 GMEB2Q9UKD1 530 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 RAB23Q9ULC3 237 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 AGAP1Q9UPQ3 857 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 MORC2Q9Y6X9 1032 aaPredicted RBP21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TCHHQ07283 1943 aa21.19■□□□□ 0.98
TNFRSF1B-204ENST00000536782 EPG5Q9HCE0 2579 aa21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SLC39A14Q15043 492 aa21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 NFE2Q16621 373 aaPredicted RBP21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 RSPO4Q2I0M5 234 aaPredicted RBP21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CMTM8Q8IZV2 173 aa21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PDCL2Q8N4E4 241 aa21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 C1orf127Q8N9H9 656 aa21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 USP28Q96RU2 1077 aa21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SMG9Q9H0W8 520 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PANK4Q9NVE7 773 aa21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TMLHEQ9NVH6 421 aa21.18■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SDK1Q7Z5N4 2213 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 FRMD3A2A2Y4 597 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 GOLGA8IPA6NC78 632 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 GOLGA8JA6NMD2 632 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 HUS1O60921 280 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PRPF40AO75400 957 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PON2Q15165 354 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TMEM86AQ8N2M4 240 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CSGALNACT2Q8N6G5 542 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 LRRC52Q8N7C0 313 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 NOC3LQ8WTT2 800 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 INTS4Q96HW7 963 aaKnown RBP21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ACBD6Q9BR61 282 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CBWD1Q9BRT8 395 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms