RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 PPP1R9BQ96SB3 815 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 MNTQ99583 582 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 MAGEB5Q9BZ81 275 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 SLC39A10Q9ULF5 831 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 ATP11BQ9Y2G3 1177 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 ERN1O75460 977 aaKnown RBP6.43□□□□□ -1.38
PRKDC-208ENST00000536710 SKAP2O75563 359 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-208ENST00000536710 NDST3O95803 873 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 CYP2C9P11712 490 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 TYRP1P17643 537 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 FDXRP22570 491 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 RNASE9P60153 205 aaKnown RBP6.43□□□□□ -1.38
PRKDC-208ENST00000536710 KRT17Q04695 432 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 PLA1AQ53H76 456 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 SPTY2D1Q68D10 685 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-208ENST00000536710 CATSPERGQ6ZRH7 1159 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 ZNF354CQ86Y25 554 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 RHOT2Q8IXI1 618 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 CPXCR1Q8N123 301 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 ZNF808Q8N4W9 903 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-208ENST00000536710 SPATA5Q8NB90 893 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 PSD4Q8NDX1 1056 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 OR56A1Q8NGH5 318 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 SMCR8Q8TEV9 937 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-208ENST00000536710 C18orf8Q96DM3 657 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 FAM89AQ96GI7 184 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 KCNC2Q96PR1 638 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 HEPHQ9BQS7 1158 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 ZSWIM1Q9BR11 485 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 EIF2AQ9BY44 585 aaKnown RBP6.43□□□□□ -1.38
PRKDC-208ENST00000536710 STK33Q9BYT3 514 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 RNPEPQ9H4A4 650 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 RAD54BQ9Y620 910 aa6.43□□□□□ -1.38
PRKDC-208ENST00000536710 CCDC195A0A1B0GUA6 201 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 LOC102723971A0A1B0GUV8 181 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 FAM234BA2RU67 622 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 CLCA1A8K7I4 914 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 H7C4K7 107 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 TOR1BO14657 336 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 HNRNPDLO14979 420 aaKnown RBP6.42□□□□□ -1.38
PRKDC-208ENST00000536710 AREL1O15033 823 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 CYP27B1O15528 508 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 INMTO95050 263 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 SPATA31D3P0C874 917 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 ACO1P21399 889 aaKnown RBP6.42□□□□□ -1.38
PRKDC-208ENST00000536710 ACVR2AP27037 513 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 HIBADHP31937 336 aaKnown RBP6.42□□□□□ -1.38
PRKDC-208ENST00000536710 VIPR2P41587 438 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 MAN2A2P49641 1150 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 RABGGTBP53611 331 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 ITGA8P53708 1063 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 HSD11B2P80365 405 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 CNGB1Q14028 1251 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-208ENST00000536710 AGAP9Q5VTM2 703 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 C1QL3Q5VWW1 255 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 SPOCD1Q6ZMY3 1216 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 Q6ZRM9 215 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 SPATA31D4Q6ZUB0 917 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 SMAP1Q8IYB5 467 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-208ENST00000536710 NEU1Q99519 415 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 HEYLQ9NQ87 328 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-208ENST00000536710 ETAA1Q9NY74 926 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 LUZP4Q9P127 313 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 LRFN1Q9P244 771 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 SHOC2Q9UQ13 582 aa6.42□□□□□ -1.38
PRKDC-208ENST00000536710 MTO1Q9Y2Z2 717 aaKnown RBP6.42□□□□□ -1.38
PRKDC-208ENST00000536710 A0A1B0GTW7 788 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 PRICKLE3O43900 615 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-208ENST00000536710 GPANK1O95872 356 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 CSTBP04080 98 aaKnown RBP6.41□□□□□ -1.38
PRKDC-208ENST00000536710 ATXN1LP0C7T5 689 aaKnown RBP6.41□□□□□ -1.38
PRKDC-208ENST00000536710 IDEP14735 1019 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 TPH1P17752 444 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 BTF3P20290 206 aaKnown RBP6.41□□□□□ -1.38
PRKDC-208ENST00000536710 GRK6P43250 576 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 WNT3P56703 355 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 LILRA4P59901 499 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 TCF15Q12870 199 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 BIRC3Q13489 604 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 BOP1Q14137 746 aaKnown RBP6.41□□□□□ -1.38
PRKDC-208ENST00000536710 INSCQ1MX18 579 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 MGAT5BQ3V5L5 792 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 PREPLQ4J6C6 727 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-208ENST00000536710 FAM102AQ5T9C2 384 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-208ENST00000536710 CACHD1Q5VU97 1274 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 TAF2Q6P1X5 1199 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 NKAPQ8N5F7 415 aaKnown RBP6.41□□□□□ -1.38
PRKDC-208ENST00000536710 ATG16L2Q8NAA4 619 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.41□□□□□ -1.38
PRKDC-208ENST00000536710 XYLT2Q9H1B5 865 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 MYLK2Q9H1R3 596 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 SMOC2Q9H3U7 446 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 OBP2BQ9NPH6 170 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 TRPM5Q9NZQ8 1165 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 HSFX1Q9UBD0 423 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 SORCS3Q9UPU3 1222 aa6.41□□□□□ -1.38
PRKDC-208ENST00000536710 GOLGA6L3A6NEY3 463 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 DCLK1O15075 740 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 ZNF185O15231 689 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 SCAF4O95104 1147 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms