RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 RHOT1Q8IXI2 618 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 FAM178BQ8IXR5 827 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ALDH16A1Q8IZ83 802 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ST13P4Q8IZP2 240 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ARHGAP24Q8N264 748 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 PDCD7Q8N8D1 485 aaKnown RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 MARCH10Q8NA82 808 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 FBXO27Q8NI29 283 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 FAM172AQ8WUF8 416 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 STMN2Q93045 179 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 PPP1R14BQ96C90 147 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 OXNAD1Q96HP4 312 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 RBM17Q96I25 401 aaKnown RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 FAM81BQ96LP2 452 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 C8orf37Q96NL8 207 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 SETDB2Q96T68 719 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 CCDC106Q9BWC9 280 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 TSSK1BQ9BXA7 367 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 PPP1R12CQ9BZL4 782 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 FHDC1Q9C0D6 1143 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 NMUR2Q9GZQ4 415 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 NYXQ9GZU5 481 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 RBM38Q9H0Z9 239 aaKnown RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 EBF3Q9H4W6 596 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ACSS3Q9H6R3 686 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 S100A14Q9HCY8 104 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 CD209Q9NNX6 404 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 FBXO6Q9NRD1 293 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 PTTG2Q9NZH5 202 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 DCTN4Q9UJW0 460 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ANAPC7Q9UJX3 599 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 PPM1HQ9ULR3 514 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 DAGLAQ9Y4D2 1042 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 PCDHGA4Q9Y5G9 962 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 PCDHA1Q9Y5I3 950 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 SNCAIPQ9Y6H5 919 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 COL16A1Q07092 1604 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 SIPA1L1O43166 1804 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 CNTNAP4Q9C0A0 1308 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 RGPD3A6NKT7 1758 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 RGPD4Q7Z3J3 1758 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 AHDC1Q5TGY3 1603 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 A0A088AWK7 358 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 B2RBV5 119 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 TISP43B9A030 160 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 NDC80O14777 642 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 ZBTB39O15060 712 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 VILLO15195 856 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 PEX1O43933 1283 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 CCNT2O60583 730 aaKnown RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 USP1O94782 785 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 FAM200BP0CF97 657 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 HARSP12081 509 aaKnown RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 UQCRBP14927 111 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 KRT4P19013 534 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 STIP1P31948 543 aaKnown RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 CPOXP36551 454 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 CCNFP41002 786 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 MXI1P50539 228 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 PRELPP51888 382 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 EMP3P54852 163 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 EIF6P56537 245 aaKnown RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 HPCAP84074 193 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 USP41Q3LFD5 358 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 DNAL1Q4LDG9 190 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 RASIP1Q5U651 963 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 CES4AQ5XG92 561 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 PLEKHA7Q6IQ23 1121 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 PGM2L1Q6PCE3 622 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 RAPH1Q70E73 1250 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 CENPUQ71F23 418 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 SPATA24Q86W54 205 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 SIAH1Q8IUQ4 282 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 ULK2Q8IYT8 1036 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 NME8Q8N427 588 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 NAT8LQ8N9F0 302 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 LINC00116Q8NCU8 138 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 RBM15BQ8NDT2 890 aaKnown RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 ZSWIM2Q8NEG5 633 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 OR6Y1Q8NGX8 325 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 CYP2W1Q8TAV3 490 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 SLC35B2Q8TB61 432 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 TMC2Q8TDI7 906 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 DHX38Q92620 1227 aaKnown RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 MCUR1Q96AQ8 359 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 TRIM11Q96F44 468 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 PRICKLE1Q96MT3 831 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 C7orf26Q96N11 449 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 ACCSQ96QU6 501 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 CBWD1Q9BRT8 395 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 HEMGNQ9BXL5 484 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 C1orf21Q9H246 121 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 C12orf65Q9H3J6 166 aaKnown RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 TMEM206Q9H813 350 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 VPS37BQ9H9H4 285 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 PCDH9Q9HC56 1237 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 DDX4Q9NQI0 724 aaKnown RBP7.28□□□□□ -1.24
CPSF7-215ENST00000536145 ETNK2Q9NVF9 386 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 MKS1Q9NXB0 559 aa7.28□□□□□ -1.24
CPSF7-215ENST00000536145 NDE1Q9NXR1 346 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms