RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 DUSP4Q13115 394 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 CBX2Q14781 532 aaPredicted RBP19.15■□□□□ 0.66
DDX55-204ENST00000536079 HSP90AA4PQ58FG1 418 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 ZNF667Q5HYK9 610 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 INTS6LQ5JSJ4 861 aaKnown RBP19.15■□□□□ 0.66
DDX55-204ENST00000536079 PPM1LQ5SGD2 360 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 LIN9Q5TKA1 542 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 DPH6Q7L8W6 267 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 SMG7Q92540 1137 aaKnown RBP19.15■□□□□ 0.66
DDX55-204ENST00000536079 TATDN2Q93075 761 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 ACBD6Q9BR61 282 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 OXCT2Q9BYC2 517 aaPredicted RBP19.15■□□□□ 0.66
DDX55-204ENST00000536079 PRKD2Q9BZL6 878 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 CRTAC1Q9NQ79 661 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 HCFC1R1Q9NWW0 138 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 GTF3C4Q9UKN8 822 aa19.15■□□□□ 0.66
DDX55-204ENST00000536079 MTCL1Q9Y4B5 1905 aaKnown RBP19.14■□□□□ 0.65
DDX55-204ENST00000536079 TACC1O75410 805 aa19.14■□□□□ 0.65
DDX55-204ENST00000536079 SP100P23497 879 aaPredicted RBP19.14■□□□□ 0.65
DDX55-204ENST00000536079 GNL1P36915 607 aaPredicted RBP19.14■□□□□ 0.65
DDX55-204ENST00000536079 LHX1P48742 406 aa19.14■□□□□ 0.65
DDX55-204ENST00000536079 FMO5P49326 533 aa19.14■□□□□ 0.65
DDX55-204ENST00000536079 CES5AQ6NT32 575 aa19.14■□□□□ 0.65
DDX55-204ENST00000536079 CNOT6LQ96LI5 555 aaKnown RBP19.14■□□□□ 0.65
DDX55-204ENST00000536079 RHOBTB2Q9BYZ6 727 aa19.14■□□□□ 0.65
DDX55-204ENST00000536079 RAB20Q9NX57 234 aa19.14■□□□□ 0.65
DDX55-204ENST00000536079 HMGXB4Q9UGU5 601 aa19.14■□□□□ 0.65
DDX55-204ENST00000536079 COQ4Q9Y3A0 265 aa19.14■□□□□ 0.65
DDX55-204ENST00000536079 INSL5Q9Y5Q6 135 aa19.14■□□□□ 0.65
DDX55-204ENST00000536079 PRRG1O14668 218 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 CLSTN1O94985 981 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 ELF1P32519 619 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 NOP14P78316 857 aaKnown RBP19.13■□□□□ 0.65
DDX55-204ENST00000536079 MYL7Q01449 175 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 ZP2Q05996 745 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 TWF1Q12792 350 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 ORC1Q13415 861 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 KLHL40Q2TBA0 621 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 UVSSAQ2YD98 709 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 ATAT1Q5SQI0 421 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 FAM171BQ6P995 826 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 SASS6Q6UVJ0 657 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 CCDC149Q6ZUS6 474 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 GRASPQ7Z6J2 395 aaPredicted RBP19.13■□□□□ 0.65
DDX55-204ENST00000536079 FBXL13Q8NEE6 735 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 OR6B3Q8NGW1 331 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 SPATA18Q8TC71 538 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 TAF4BQ92750 862 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 SYT15Q9BQS2 421 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 BCO2Q9BYV7 579 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 DNAJC25Q9H1X3 360 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 SAMSN1Q9NSI8 373 aaKnown RBP19.13■□□□□ 0.65
DDX55-204ENST00000536079 CEP72Q9P209 647 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 DNMT3BQ9UBC3 853 aaKnown RBP19.13■□□□□ 0.65
DDX55-204ENST00000536079 DPP7Q9UHL4 492 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 YIPF1Q9Y548 306 aa19.13■□□□□ 0.65
DDX55-204ENST00000536079 STX10O60499 249 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 N4BP1O75113 896 aaKnown RBP19.12■□□□□ 0.65
DDX55-204ENST00000536079 GNA14O95837 355 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 HNRNPA1P09651 372 aaKnown RBP eCLIP19.12■□□□□ 0.65
DDX55-204ENST00000536079 HOXA9P31269 272 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 MTHFRP42898 656 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 GPR15P49685 360 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 TYRO3Q06418 890 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 KCNH2Q12809 1159 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 POTEHQ6S545 545 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 CREBRFQ8IUR6 639 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 LMO3Q8TAP4 145 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 ARID3AQ99856 593 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 PHF7Q9BWX1 381 aaPredicted RBP19.12■□□□□ 0.65
DDX55-204ENST00000536079 COL25A1Q9BXS0 654 aaPredicted RBP19.12■□□□□ 0.65
DDX55-204ENST00000536079 SNX25Q9H3E2 840 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 THAP9Q9H5L6 903 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 ABI2Q9NYB9 513 aaPredicted RBP19.12■□□□□ 0.65
DDX55-204ENST00000536079 DACH1Q9UI36 760 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 C2orf16Q68DN1 1984 aa19.12■□□□□ 0.65
DDX55-204ENST00000536079 FGFR1OPO95684 399 aaKnown RBP19.11■□□□□ 0.65
DDX55-204ENST00000536079 FAM163BP0C2L3 166 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 CCDC192P0DO97 292 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 TSPY1Q01534 308 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 STX1AQ16623 288 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 ADHFE1Q8IWW8 467 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 DCP1BQ8IZD4 617 aaKnown RBP19.11■□□□□ 0.65
DDX55-204ENST00000536079 HS6ST3Q8IZP7 471 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 STKLD1Q8NE28 680 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 RPGRIP1Q96KN7 1286 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 RIPOR3Q96MK2 946 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 TWNKQ96RR1 684 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 UHRF1Q96T88 793 aaPredicted RBP19.11■□□□□ 0.65
DDX55-204ENST00000536079 FUCA2Q9BTY2 467 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 PIDD1Q9HB75 910 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 WDR6Q9NNW5 1121 aaKnown RBP19.11■□□□□ 0.65
DDX55-204ENST00000536079 ANO10Q9NW15 660 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 CDH9Q9ULB4 789 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 MAFFQ9ULX9 164 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 DOCK6Q96HP0 2047 aa19.11■□□□□ 0.65
DDX55-204ENST00000536079 C19orf67A6NJJ6 358 aa19.1■□□□□ 0.65
DDX55-204ENST00000536079 PMM2O15305 246 aa19.1■□□□□ 0.65
DDX55-204ENST00000536079 AFPP02771 609 aaKnown RBP19.1■□□□□ 0.65
DDX55-204ENST00000536079 HAPLN1P10915 354 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms