RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 GJA1P17302 382 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 PFKLP17858 780 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 GABRR2P28476 465 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 RAP1GAPP47736 663 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 TAF6P49848 677 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 RAD51AP2Q09MP3 1159 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 NFE2Q16621 373 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 ITPRIPL2Q3MIP1 535 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 CFAP221Q4G0U5 840 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 STXBP5Q5T5C0 1151 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 LRRTM3Q86VH5 581 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 GPBP1Q86WP2 473 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 YAF2Q8IY57 180 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 CAMKK1Q8N5S9 505 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 MYCT1Q8N699 235 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 LRRC52Q8N7C0 313 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 LARP4BQ92615 738 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 CHFRQ96EP1 664 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 PGLYRP2Q96PD5 576 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 PKMYT1Q99640 499 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 ACBD6Q9BR61 282 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 SEMA4GQ9NTN9 838 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 THG1LQ9NWX6 298 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 STK17AQ9UEE5 414 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 PCDHGA5Q9Y5G8 931 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 FAM208BQ5VWN6 2430 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 ANKRD63C9JTQ0 380 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 K7ENM7 598 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 GABRDO14764 452 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 ATG13O75143 517 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 FAM13AO94988 1023 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 HARSP12081 509 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 PLCG1P19174 1290 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 AMPD2Q01433 879 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 SPAG1Q07617 926 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 SIM2Q14190 667 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 VEPH1Q14D04 833 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 FBXO43Q4G163 708 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 PLA2G2CQ5R387 149 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 GPR158Q5T848 1215 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 DPH6Q7L8W6 267 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 MON1AQ86VX9 555 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 DCP1BQ8IZD4 617 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 THEM5Q8N1Q8 247 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 TMEM86AQ8N2M4 240 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 TTC9BQ8N6N2 239 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 BICD1Q96G01 975 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 TMEM209Q96SK2 561 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 ATXN3LQ9H3M9 355 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 SLITRK6Q9H5Y7 841 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 DPP3Q9NY33 737 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 GTSE1Q9NYZ3 720 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 AGO2Q9UKV8 859 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 GREB1Q4ZG55 1949 aa12.11□□□□□ -0.47
CLSTN3-206ENST00000535668 SLC38A8A6NNN8 435 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 DPYSL4O14531 572 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 CYB561D2O14569 222 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 NOL4O94818 638 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 FAM163BP0C2L3 166 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 ZNF806P0C7X5 589 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 CSH1P0DML2 217 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 CSH2P0DML3 217 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 GARTP22102 1010 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 GJB2P29033 226 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 GUCY2FP51841 1108 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 KPNA1P52294 538 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 NLRP12P59046 1061 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 ALCAMQ13740 583 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 SV2CQ496J9 727 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 SLC39A12Q504Y0 691 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 ADALQ6DHV7 355 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 PRR23CQ6ZRP0 262 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 METTL23Q86XA0 190 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 TMEM130Q8N3G9 435 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 DNAJC19Q96DA6 116 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 TMEM206Q9H813 350 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 HPS4Q9NQG7 708 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 TDP1Q9NUW8 608 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 EBF1Q9UH73 591 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 RALGAPA1Q6GYQ0 2036 aa12.1□□□□□ -0.47
CLSTN3-206ENST00000535668 KIAA0391O15091 583 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 TBCAO75347 108 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 LDHAP00338 332 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 GAP43P17677 238 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 DRD1P21728 446 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 NMT1P30419 496 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 MAGEA11P43364 429 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 SHC2P98077 582 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 SPEM2Q0P670 501 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 RUNX3Q13761 415 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 MCM6Q14566 821 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 PDGFRLQ15198 375 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 WSCD1Q658N2 575 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 FAM171BQ6P995 826 aa12.09□□□□□ -0.47
CLSTN3-206ENST00000535668 Q6ZS52 159 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms