RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 RNPEPQ9H4A4 650 aa12.76□□□□□ -0.37
LINC01089-204ENST00000535643 AGO3Q9H9G7 860 aaKnown RBP12.76□□□□□ -0.37
LINC01089-204ENST00000535643 ZNF287Q9HBT7 754 aa12.76□□□□□ -0.37
LINC01089-204ENST00000535643 DNMT3LQ9UJW3 386 aa12.76□□□□□ -0.37
LINC01089-204ENST00000535643 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
LINC01089-204ENST00000535643 MRPS17Q9Y2R5 130 aaKnown RBP12.76□□□□□ -0.37
LINC01089-204ENST00000535643 PLXNB3Q9ULL4 1909 aa12.76□□□□□ -0.37
LINC01089-204ENST00000535643 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 CCDC188H7C350 402 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 CHUKO15111 745 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 KIF1CO43896 1103 aaKnown RBP12.75□□□□□ -0.37
LINC01089-204ENST00000535643 ZMYND10O75800 440 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 HEXIM1O94992 359 aaKnown RBP12.75□□□□□ -0.37
LINC01089-204ENST00000535643 SMIM10L2AP0DMW4 78 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 SMIM10L2BP0DMW5 78 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 NF1P21359 2839 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 HOXC13P31276 330 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 MDH1P40925 334 aaKnown RBP12.75□□□□□ -0.37
LINC01089-204ENST00000535643 PFKPQ01813 784 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 MGAT3Q09327 533 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 PPP2R5EQ16537 467 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 TMEM266Q2M3C6 531 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 FBXO47Q5MNV8 452 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 FAM102BQ5T8I3 360 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 NAA35Q5VZE5 725 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 KCNT2Q6UVM3 1135 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 PNMA1Q8ND90 353 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 RRP36Q96EU6 259 aaKnown RBP12.75□□□□□ -0.37
LINC01089-204ENST00000535643 DRC1Q96MC2 740 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 CCDC43Q96MW1 224 aaKnown RBP12.75□□□□□ -0.37
LINC01089-204ENST00000535643 INPP4AQ96PE3 977 aaPredicted RBP12.75□□□□□ -0.37
LINC01089-204ENST00000535643 ISCUQ9H1K1 167 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 MLXIPQ9HAP2 919 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 TMBIM4Q9HC24 238 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 C6orf50Q9HD87 102 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 TMEM59LQ9UK28 342 aa12.75□□□□□ -0.37
LINC01089-204ENST00000535643 NDRG2Q9UN36 371 aaKnown RBP12.75□□□□□ -0.37
LINC01089-204ENST00000535643 BZW2Q9Y6E2 419 aaKnown RBP12.75□□□□□ -0.37
LINC01089-204ENST00000535643 FNDC1Q4ZHG4 1894 aaPredicted RBP12.74□□□□□ -0.37
LINC01089-204ENST00000535643 ZMYM2Q9UBW7 1377 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 PALM3A6NDB9 673 aaPredicted RBP12.74□□□□□ -0.37
LINC01089-204ENST00000535643 C5orf60A6NFR6 353 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 LRRC53A6NM62 1247 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 FDX1P10109 184 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 CD52P31358 61 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 MNAT1P51948 309 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 ACTN3Q08043 901 aaPredicted RBP12.74□□□□□ -0.37
LINC01089-204ENST00000535643 EHHADHQ08426 723 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 IFFO1Q0D2I5 559 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 STK4Q13043 487 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 PDCLQ13371 301 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 GAS6Q14393 721 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 PDIA5Q14554 519 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 INF2Q27J81 1249 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 ZNF423Q2M1K9 1284 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 MEI1Q5TIA1 1274 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 SFMBT2Q5VUG0 894 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 HGSNATQ68CP4 663 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 KCNV1Q6PIU1 500 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 C6orf89Q6UWU4 347 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 TSHZ1Q6ZSZ6 1077 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 ZC3H3Q8IXZ2 948 aaKnown RBP12.74□□□□□ -0.37
LINC01089-204ENST00000535643 KIAA0895Q8NCT3 520 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 PPTC7Q8NI37 304 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 ZNF473Q8WTR7 871 aaKnown RBP12.74□□□□□ -0.37
LINC01089-204ENST00000535643 NANOS1Q8WY41 292 aaKnown RBP12.74□□□□□ -0.37
LINC01089-204ENST00000535643 TAF4BQ92750 862 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 EMID1Q96A84 441 aaPredicted RBP12.74□□□□□ -0.37
LINC01089-204ENST00000535643 TRIM4Q9C037 500 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 RBM12Q9NTZ6 932 aaKnown RBP12.74□□□□□ -0.37
LINC01089-204ENST00000535643 MAD2L2Q9UI95 211 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 DUSP10Q9Y6W6 482 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 BAZ2BQ9UIF8 2168 aaKnown RBP12.74□□□□□ -0.37
LINC01089-204ENST00000535643 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
LINC01089-204ENST00000535643 TEX51A0A1B0GUA7 166 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 ZNF233A6NK53 670 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 H0YHG0 523 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 GFPT2O94808 682 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 PPM1AP35813 382 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 KLK7P49862 253 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 ARHGAP4P98171 946 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 ITGB3BPQ13352 177 aaPredicted RBP12.73□□□□□ -0.37
LINC01089-204ENST00000535643 LY6DQ14210 128 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 SLC18A3Q16572 532 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 PPP1R18Q6NYC8 613 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 RRAGAQ7L523 313 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 GET4Q7L5D6 327 aaPredicted RBP12.73□□□□□ -0.37
LINC01089-204ENST00000535643 CROCCP2Q86T23 111 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 WDR5BQ86VZ2 330 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 NLRP14Q86W24 1093 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 MYCBPAPQ8TBZ2 947 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 ACTRT1Q8TDG2 376 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 HDAC7Q8WUI4 952 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 LARP4BQ92615 738 aaKnown RBP12.73□□□□□ -0.37
LINC01089-204ENST00000535643 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
LINC01089-204ENST00000535643 FTHL17Q9BXU8 183 aa12.73□□□□□ -0.37
LINC01089-204ENST00000535643 PLEKHA4Q9H4M7 779 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms