RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 CNNM4Q6P4Q7 775 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 KCNT2Q6UVM3 1135 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 EP400NLQ6ZTU2 488 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 ADSSL1Q8N142 457 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 CCDC63Q8NA47 563 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 FANCBQ8NB91 859 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 CCDC26Q8TAB7 109 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 LMBR1Q8WVP7 490 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 LINC01599Q8WXQ3 324 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 MYLIPQ8WY64 445 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 IFT81Q8WYA0 676 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 ARL8AQ96BM9 186 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 HVCN1Q96D96 273 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 TRMT2BQ96GJ1 504 aaKnown RBP7.1□□□□□ -1.27
USP28-202ENST00000535607 PBKQ96KB5 322 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 MED15Q96RN5 788 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 ERGIC2Q96RQ1 377 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 PSMD1Q99460 953 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 TUBGCP2Q9BSJ2 902 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 LRRC27Q9C0I9 530 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 PDGFDQ9GZP0 370 aaPredicted RBP7.1□□□□□ -1.27
USP28-202ENST00000535607 TAF1DQ9H5J8 278 aaPredicted RBP7.1□□□□□ -1.27
USP28-202ENST00000535607 TMBIM4Q9HC24 238 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 SPON1Q9HCB6 807 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 EPB41L5Q9HCM4 733 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 PPANQ9NQ55 473 aaKnown RBP7.1□□□□□ -1.27
USP28-202ENST00000535607 INCENPQ9NQS7 918 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 INTS7Q9NVH2 962 aaKnown RBP7.1□□□□□ -1.27
USP28-202ENST00000535607 CLDND1Q9NY35 253 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 MARCH2Q9P0N8 246 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 DDX20Q9UHI6 824 aaKnown RBP7.1□□□□□ -1.27
USP28-202ENST00000535607 REXO2Q9Y3B8 237 aaKnown RBP7.1□□□□□ -1.27
USP28-202ENST00000535607 PCDHB6Q9Y5E3 794 aa7.1□□□□□ -1.27
USP28-202ENST00000535607 MYH2Q9UKX2 1941 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 C7orf72A4D263 438 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 CCT8L1PA6NM43 557 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 ASAP2O43150 1006 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 PRPF3O43395 683 aaKnown RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 HYAL3O43820 417 aaPredicted RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 ZBTB7AO95365 584 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 ATP6V1G2O95670 118 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 C6orf222P0C671 652 aaPredicted RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 SLC5A1P13866 664 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 CCND1P24385 295 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 CTNNA1P35221 906 aaKnown RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 IGFALSP35858 605 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 ZNF131P52739 623 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 LACTBP83111 547 aaPredicted RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 ATP2C1P98194 919 aaPredicted RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 GUCY2DQ02846 1103 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 CHRNDQ07001 517 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 ADCY2Q08462 1091 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 MAP3K12Q12852 859 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 GRIK3Q13003 919 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 ITGB3BPQ13352 177 aaPredicted RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 UBE4AQ14139 1066 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 HLTFQ14527 1009 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP28-202ENST00000535607 TESK1Q15569 626 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 CDC37Q16543 378 aaPredicted RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 HSF5Q4G112 596 aaPredicted RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 VWA3BQ502W6 1294 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 LRRC24Q50LG9 513 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 DALRD3Q5D0E6 543 aaKnown RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 AKNAD1Q5T1N1 836 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 CAPRIN2Q6IMN6 1127 aaKnown RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 CATIPQ7Z7H3 387 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 DDX53Q86TM3 631 aaKnown RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 GRAMD1CQ8IYS0 662 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 AHI1Q8N157 1196 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 LZTR1Q8N653 840 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 CSGALNACT2Q8N6G5 542 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 RCBTB1Q8NDN9 531 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 LPIN2Q92539 896 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 ESR2Q92731 530 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 SYN2Q92777 582 aaPredicted RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 CELF1Q92879 486 aaKnown RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 FAXDC2Q96IV6 333 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 AIFM3Q96NN9 605 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 JMJD8Q96S16 334 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 ISCUQ9H1K1 167 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 ZFP64Q9NPA5 681 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 FAM114A2Q9NRY5 505 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 GJB4Q9NTQ9 266 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 GULP1Q9UBP9 304 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 LRWD1Q9UFC0 647 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 TMEFF2Q9UIK5 374 aaPredicted RBP7.09□□□□□ -1.27
USP28-202ENST00000535607 NPFFR2Q9Y5X5 522 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 TIAM2Q8IVF5 1701 aa7.09□□□□□ -1.27
USP28-202ENST00000535607 SNED1Q8TER0 1413 aa7.09□□□□□ -1.28
USP28-202ENST00000535607 MAST2Q6P0Q8 1798 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 ZNF804BA4D1E1 1349 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 A0A0U1RQJ8 604 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 FAM47E-STBD1D6RA91 191 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 E7ENQ6 273 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 ZNF185O15231 689 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 ORC4O43929 436 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 RANBP6O60518 1105 aaKnown RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 CRTAMO95727 393 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 ASLP04424 464 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 MYBL2P10244 700 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms