RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 HAPLN1P10915 354 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-228ENST00000534373 GJA1P17302 382 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 CDC25CP30307 473 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 HOXD13P35453 343 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 RPS9P46781 194 aaKnown RBP14.41□□□□□ -0.1
CAPN1-228ENST00000534373 LHX1P48742 406 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 MYL7Q01449 175 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 MYO1EQ12965 1108 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 UBXN2BQ14CS0 331 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 ARHGAP15Q53QZ3 475 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 C1orf228Q6PIY5 440 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 TPRG1Q6ZUI0 275 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 GAREM2Q75VX8 874 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 FRMD5Q7Z6J6 570 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 PDCL2Q8N4E4 241 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 TTC9BQ8N6N2 239 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 TOP6BLQ8N6T0 577 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 FAM200AQ8TCP9 573 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 LEO1Q8WVC0 666 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-228ENST00000534373 MSANTD3Q96H12 275 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 SEPT5Q99719 369 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-228ENST00000534373 ATXN3LQ9H3M9 355 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 ABCB6Q9NP58 842 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 HSPBP1Q9NZL4 362 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 PCDHB5Q9Y5E4 795 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 ZFHX2Q9C0A1 2572 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-228ENST00000534373 HEPACAM2A8MVW5 462 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 GABRDO14764 452 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 CHADO15335 359 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 TGFB1I1O43294 461 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 PRPF40AO75400 957 aaKnown RBP14.4□□□□□ -0.1
CAPN1-228ENST00000534373 TNNC2P02585 160 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 KRT19P08727 400 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 GABRR2P28476 465 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 GDI1P31150 447 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 VIPR2P41587 438 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 FCHO2Q0JRZ9 810 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 GRM2Q14416 872 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 TAF12Q16514 161 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 ZNF528Q3MIS6 628 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 ZC3H14Q6PJT7 736 aaKnown RBP14.4□□□□□ -0.1
CAPN1-228ENST00000534373 MAMSTRQ6ZN01 415 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 HS2ST1Q7LGA3 356 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 WDR49Q8IV35 697 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 ARID3BQ8IVW6 561 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-228ENST00000534373 YAF2Q8IY57 180 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 CEP57L1Q8IYX8 460 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 GLIS3Q8NEA6 775 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 NOC3LQ8WTT2 800 aaKnown RBP14.4□□□□□ -0.1
CAPN1-228ENST00000534373 HPS3Q969F9 1004 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 MTMR12Q9C0I1 747 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 TASP1Q9H6P5 420 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 HEBP1Q9NRV9 189 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 AGPAT3Q9NRZ7 376 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 DDX43Q9NXZ2 648 aaKnown RBP14.4□□□□□ -0.1
CAPN1-228ENST00000534373 SIX4Q9UIU6 781 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 FBXO4Q9UKT5 387 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 L1RE1Q9UN81 338 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 MTF2Q9Y483 593 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-228ENST00000534373 SNX9Q9Y5X1 595 aa14.4□□□□□ -0.1
CAPN1-228ENST00000534373 TULP1O00294 542 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-228ENST00000534373 SOAT2O75908 522 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 FAM163BP0C2L3 166 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 SLFN14P0C7P3 912 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 ATF6P18850 670 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 CD72P21854 359 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 PCSK1P29120 753 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 RPL10AP62906 217 aaKnown RBP14.39□□□□□ -0.11
CAPN1-228ENST00000534373 DNM1Q05193 864 aaKnown RBP14.39□□□□□ -0.11
CAPN1-228ENST00000534373 BFSP1Q12934 665 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 SNRNP35Q16560 246 aaKnown RBP14.39□□□□□ -0.11
CAPN1-228ENST00000534373 BMT2Q1RMZ1 405 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 FOXD4L6Q3SYB3 417 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-228ENST00000534373 FOXD4L3Q6VB84 417 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-228ENST00000534373 ASCL5Q7RTU5 278 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 LIMS2Q7Z4I7 341 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 CBWD2Q8IUF1 395 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 C12orf56Q8IXR9 622 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 XXYLT1Q8NBI6 393 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 SCFD1Q8WVM8 642 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 FUBP3Q96I24 572 aaKnown RBP eCLIP14.39□□□□□ -0.11
CAPN1-228ENST00000534373 GCNAQ96QF7 691 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 LPIN3Q9BQK8 851 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 IER2Q9BTL4 223 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 MKNK1Q9BUB5 465 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 ABI2Q9NYB9 513 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-228ENST00000534373 USP25Q9UHP3 1055 aa14.39□□□□□ -0.11
CAPN1-228ENST00000534373 TSC2P49815 1807 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 SHISA7A6NL88 538 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 ARNTLO00327 626 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 DPYSL4O14531 572 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 LAMTOR5O43504 91 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 LRRN2O75325 713 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 MYL1P05976 194 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 SP9P0CG40 484 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 CSH1P0DML2 217 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 CSH2P0DML3 217 aa14.38□□□□□ -0.11
CAPN1-228ENST00000534373 DDX6P26196 483 aaKnown RBP eCLIP14.38□□□□□ -0.11
CAPN1-228ENST00000534373 TARSP26639 723 aaKnown RBP14.38□□□□□ -0.11
CAPN1-228ENST00000534373 PSMD2Q13200 908 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms