RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 CCDC60Q8IWA6 550 aaPredicted RBP6.23□□□□□ -1.41
CHKA-208ENST00000533910 LRRC8AQ8IWT6 810 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 ANKRD13CQ8N6S4 541 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 KIAA1524Q8TCG1 905 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 NINJ1Q92982 152 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 UTP4Q969X6 686 aaKnown RBP6.23□□□□□ -1.41
CHKA-208ENST00000533910 CNOT6LQ96LI5 555 aaKnown RBP6.23□□□□□ -1.41
CHKA-208ENST00000533910 ZNF830Q96NB3 372 aaPredicted RBP6.23□□□□□ -1.41
CHKA-208ENST00000533910 TSG101Q99816 390 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 PTPN18Q99952 460 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 STRA6Q9BX79 667 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 CEP41Q9BYV8 373 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 GBP3Q9H0R5 595 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 ST6GALNAC4Q9H4F1 302 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 SPTLC3Q9NUV7 552 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 TAB2Q9NYJ8 693 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 CGGBP1Q9UFW8 167 aaPredicted RBP6.23□□□□□ -1.41
CHKA-208ENST00000533910 TPX2Q9ULW0 747 aaKnown RBP6.23□□□□□ -1.41
CHKA-208ENST00000533910 PYCARDQ9ULZ3 195 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 TRAF3IP3Q9Y228 551 aa6.23□□□□□ -1.41
CHKA-208ENST00000533910 CCDC163A0A0D9SF12 145 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 FAM95CA0A1B0GW59 222 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 MANSC4A6NHS7 340 aaPredicted RBP6.22□□□□□ -1.41
CHKA-208ENST00000533910 ASB14A6NK59 587 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 PRR33A8MZF0 331 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 PDXKO00764 312 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 N4BP3O15049 544 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 TEX33O43247 280 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 STRNO43815 780 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 DLX3O60479 287 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 ARIH2O95376 493 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 MYBP10242 640 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 SFPQP23246 707 aaKnown RBP eCLIP6.22□□□□□ -1.41
CHKA-208ENST00000533910 RTP1P59025 263 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 FKBP3Q00688 224 aaKnown RBP6.22□□□□□ -1.41
CHKA-208ENST00000533910 PRKCEQ02156 737 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 ALCAMQ13740 583 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 TRIM14Q14142 442 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 NEDD9Q14511 834 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 KNOP1Q1ED39 458 aaKnown RBP6.22□□□□□ -1.41
CHKA-208ENST00000533910 LONRF2Q1L5Z9 754 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 DPY19L1Q2PZI1 675 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 ZNF792Q3KQV3 632 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 TM4SF20Q53R12 229 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 ANKRD39Q53RE8 183 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 PLA2G4FQ68DD2 849 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 MIS18BP1Q6P0N0 1132 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 CCDC62Q6P9F0 684 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 SEPT14Q6ZU15 432 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 STXBP4Q6ZWJ1 553 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 SAPCD2Q86UD0 394 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 SLC17A8Q8NDX2 589 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 CCDC112Q8NEF3 446 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 AFAP1L1Q8TED9 768 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 TMEM174Q8WUU8 243 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 EZH1Q92800 747 aaPredicted RBP6.22□□□□□ -1.41
CHKA-208ENST00000533910 KCNN1Q92952 543 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 ERGIC2Q96RQ1 377 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 TUBGCP2Q9BSJ2 902 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 DUSP23Q9BVJ7 150 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 BCAS3Q9H6U6 928 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 MRPL44Q9H9J2 332 aaKnown RBP6.22□□□□□ -1.41
CHKA-208ENST00000533910 KCND1Q9NSA2 647 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 TYW1Q9NV66 732 aaKnown RBP6.22□□□□□ -1.41
CHKA-208ENST00000533910 GEMIN8Q9NWZ8 242 aaKnown RBP6.22□□□□□ -1.41
CHKA-208ENST00000533910 TBC1D7Q9P0N9 293 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 WHRNQ9P202 907 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 GABBR1Q9UBS5 961 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 DIS3Q9Y2L1 958 aaKnown RBP6.22□□□□□ -1.41
CHKA-208ENST00000533910 EMC9Q9Y3B6 208 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 TELO2Q9Y4R8 837 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 CASP8AP2Q9UKL3 1982 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 EMSYQ7Z589 1322 aa6.22□□□□□ -1.41
CHKA-208ENST00000533910 DOCK3Q8IZD9 2030 aa6.21□□□□□ -1.41
CHKA-208ENST00000533910 THSD7BQ9C0I4 1608 aa6.21□□□□□ -1.41
CHKA-208ENST00000533910 GSTTP1A0A1W2PQM5 241 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 TMEM150BA6NC51 233 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 IGF2BP3O00425 579 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHKA-208ENST00000533910 NOP56O00567 594 aaKnown RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 NKRFO15226 690 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHKA-208ENST00000533910 SLC16A3O15427 465 aaKnown RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 TGFB1I1O43294 461 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 HYAL3O43820 417 aaPredicted RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 CALUO43852 315 aaPredicted RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 USO1O60763 962 aaKnown RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 MFAP3LO75121 409 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 PRPF6O94906 941 aaKnown RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 ZRANB2O95218 330 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHKA-208ENST00000533910 GCNT3O95395 438 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 GGPS1O95749 300 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 GNA14O95837 355 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 GYPCP04921 128 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 FAM87AP0C7U9 286 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 ITGA4P13612 1032 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 PLS3P13797 630 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 POU3F3P20264 500 aaPredicted RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 ADORA2AP29274 412 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 CNGA1P29973 690 aa6.21□□□□□ -1.42
CHKA-208ENST00000533910 NMT1P30419 496 aaKnown RBP6.21□□□□□ -1.42
CHKA-208ENST00000533910 MAPK4P31152 587 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms