RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 DHX58Q96C10 678 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 FAM84AQ96KN4 292 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 IL21Q9HBE4 155 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 PDE11AQ9HCR9 933 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 ITGA11Q9UKX5 1188 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 L1RE1Q9UN81 338 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 NUP210Q8TEM1 1887 aaPredicted RBP18.77■□□□□ 0.6
VPS51-213ENST00000533827 CACNA1IQ9P0X4 2223 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 WEE1P30291 646 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 HOXD13P35453 343 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 MLLT6P55198 1093 aaPredicted RBP18.76■□□□□ 0.59
VPS51-213ENST00000533827 AMPD3Q01432 767 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 VEPH1Q14D04 833 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 GPR158Q5T848 1215 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 CNNM4Q6P4Q7 775 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 STXBP4Q6ZWJ1 553 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 CSGALNACT2Q8N6G5 542 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 IQUBQ8NA54 791 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 TMLHEQ9NVH6 421 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 GDAP2Q9NXN4 497 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 ABI2Q9NYB9 513 aaPredicted RBP18.76■□□□□ 0.59
VPS51-213ENST00000533827 SIX4Q9UIU6 781 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 PIAS3Q9Y6X2 628 aa18.76■□□□□ 0.59
VPS51-213ENST00000533827 TULP1O00294 542 aaPredicted RBP18.75■□□□□ 0.59
VPS51-213ENST00000533827 CHADO15335 359 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 HUS1O60921 280 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 ZSCAN22P10073 491 aaPredicted RBP18.75■□□□□ 0.59
VPS51-213ENST00000533827 PDIA4P13667 645 aaKnown RBP18.75■□□□□ 0.59
VPS51-213ENST00000533827 ARHGAP15Q53QZ3 475 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 FOXD4L5Q5VV16 416 aaPredicted RBP18.75■□□□□ 0.59
VPS51-213ENST00000533827 EPM2AIP1Q7L775 607 aaPredicted RBP18.75■□□□□ 0.59
VPS51-213ENST00000533827 GPIHBP1Q8IV16 184 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 TMEM86AQ8N2M4 240 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 ZNF507Q8TCN5 953 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 KCNG4Q8TDN1 519 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 GIPC2Q8TF65 315 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 NOC3LQ8WTT2 800 aaKnown RBP18.75■□□□□ 0.59
VPS51-213ENST00000533827 FOXD4L4Q8WXT5 416 aaPredicted RBP18.75■□□□□ 0.59
VPS51-213ENST00000533827 FAM3CQ92520 227 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 LRRC3BQ96PB8 259 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 C7orf25Q9BPX7 421 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 ACBD6Q9BR61 282 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 MTMR12Q9C0I1 747 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 OBP2AQ9NY56 170 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 NDRG2Q9UN36 371 aaKnown RBP18.75■□□□□ 0.59
VPS51-213ENST00000533827 PCDHB5Q9Y5E4 795 aa18.75■□□□□ 0.59
VPS51-213ENST00000533827 EIF3DO15371 548 aaKnown RBP eCLIP18.74■□□□□ 0.59
VPS51-213ENST00000533827 F13A1P00488 732 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 TMEM191BP0C7N4 346 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 CDC25CP30307 473 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 ASIC1P78348 528 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 RBP5P82980 135 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 CYP4F8P98187 520 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 TSPY1Q01534 308 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 CSTF1Q05048 431 aaKnown RBP18.74■□□□□ 0.59
VPS51-213ENST00000533827 BFSP1Q12934 665 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 HSCBQ8IWL3 235 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 YAF2Q8IY57 180 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 LEO1Q8WVC0 666 aaPredicted RBP18.74■□□□□ 0.59
VPS51-213ENST00000533827 CHRDQ9H2X0 955 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 TASP1Q9H6P5 420 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 INTS13Q9NVM9 706 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 DDX43Q9NXZ2 648 aaKnown RBP18.74■□□□□ 0.59
VPS51-213ENST00000533827 SNX9Q9Y5X1 595 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 PTPRJQ12913 1337 aa18.74■□□□□ 0.59
VPS51-213ENST00000533827 FRYLO94915 3013 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 ZNF233A6NK53 670 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 KRT19P08727 400 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 HMGA1P17096 107 aaKnown RBP18.73■□□□□ 0.59
VPS51-213ENST00000533827 EHHADHQ08426 723 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 MTAPQ13126 283 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 SURF1Q15526 300 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 TAF12Q16514 161 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 NFE2Q16621 373 aaPredicted RBP18.73■□□□□ 0.59
VPS51-213ENST00000533827 INTS6LQ5JSJ4 861 aaKnown RBP18.73■□□□□ 0.59
VPS51-213ENST00000533827 LMBRD2Q68DH5 695 aaPredicted RBP18.73■□□□□ 0.59
VPS51-213ENST00000533827 MAMSTRQ6ZN01 415 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 TMEM150AQ86TG1 271 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 OSTM1Q86WC4 334 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 CBWD2Q8IUF1 395 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 TOP6BLQ8N6T0 577 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 OR5B17Q8NGF7 314 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 SPATA18Q8TC71 538 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 CSGALNACT1Q8TDX6 532 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 NELL1Q92832 810 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 MSANTD3Q96H12 275 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 ANKRD36BP1Q96IX9 119 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 PKMYT1Q99640 499 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 PI4K2AQ9BTU6 479 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 SLC46A2Q9BY10 475 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 PRMT8Q9NR22 394 aaPredicted RBP18.73■□□□□ 0.59
VPS51-213ENST00000533827 HSPBP1Q9NZL4 362 aa18.73■□□□□ 0.59
VPS51-213ENST00000533827 DPYSL4O14531 572 aa18.72■□□□□ 0.59
VPS51-213ENST00000533827 GABRDO14764 452 aa18.72■□□□□ 0.59
VPS51-213ENST00000533827 POLR2DO15514 142 aaKnown RBP18.72■□□□□ 0.59
VPS51-213ENST00000533827 TGFB1I1O43294 461 aa18.72■□□□□ 0.59
VPS51-213ENST00000533827 PRAMEF12O95522 483 aa18.72■□□□□ 0.59
VPS51-213ENST00000533827 F11P03951 625 aa18.72■□□□□ 0.59
VPS51-213ENST00000533827 ACAT1P24752 427 aaKnown RBP18.72■□□□□ 0.59
VPS51-213ENST00000533827 CCNE1P24864 410 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms