RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 ZNF268Q14587 947 aaPredicted RBP12.63□□□□□ -0.39
ATM-222ENST00000533733 PPP1R21Q6ZMI0 780 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 EXOC3L1Q86VI1 746 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 TDRPQ86YL5 185 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 RHPN2Q8IUC4 686 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 THNSL1Q8IYQ7 743 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 CNPY4Q8N129 248 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 ARHGEF2Q92974 986 aaKnown RBP12.63□□□□□ -0.39
ATM-222ENST00000533733 SPATA33Q96N06 139 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 XYLT2Q9H1B5 865 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 NINJ2Q9NZG7 142 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 KIAA1257Q9ULG3 409 aa12.63□□□□□ -0.39
ATM-222ENST00000533733 R3HDM2Q9Y2K5 976 aaKnown RBP12.63□□□□□ -0.39
ATM-222ENST00000533733 hCG_1818297A0A087WSY0 165 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 ACSL3O95573 720 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 CALCAP01258 141 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 GSTA1P08263 222 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 CFHP08603 1231 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 CD58P19256 250 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 SLC18A1P54219 525 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 VCPP55072 806 aaKnown RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 MBTD1Q05BQ5 628 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 LAMC2Q13753 1193 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 PRKG1Q13976 671 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 STILQ15468 1287 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 CNGA2Q16280 664 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 TMEM132AQ24JP5 1023 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 ZFYVE27Q5T4F4 411 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 RNF187Q5TA31 235 aaPredicted RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 ARHGEF18Q6ZSZ5 1173 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 ANKS1BQ7Z6G8 1248 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 ELMO3Q96BJ8 720 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 NCAPGQ9BPX3 1015 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 HERPUD2Q9BSE4 406 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 HEMGNQ9BXL5 484 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 FETUBQ9UGM5 382 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 PNMA3Q9UL41 463 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 TPX2Q9ULW0 747 aaKnown RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 ZNF148Q9UQR1 794 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 PLXNB2O15031 1838 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 INO80B-WBP1J3KQ70 363 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 ARIH2O95376 493 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 TSHRP16473 764 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 CHKAP35790 457 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 MAGEA4P43358 317 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 IFI35P80217 286 aaPredicted RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 OASLQ15646 514 aaKnown RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 HSDL1Q3SXM5 330 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 EFCAB12Q6NXP0 572 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 MFSD7Q6UXD7 560 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 APBB1IPQ7Z5R6 666 aaPredicted RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 SGSM3Q96HU1 749 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 FGD4Q96M96 766 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 INO80BQ9C086 356 aaPredicted RBP12.62□□□□□ -0.39
ATM-222ENST00000533733 CDT1Q9H211 546 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 CAPN7Q9Y6W3 813 aa12.62□□□□□ -0.39
ATM-222ENST00000533733 KAT6AQ92794 2004 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 SMIM23A6NLE4 172 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 CAPN15O75808 1086 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 HMGCRP04035 888 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 TXNP10599 105 aaKnown RBP12.61□□□□□ -0.39
ATM-222ENST00000533733 KRT3P12035 628 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 ATF7P17544 494 aaPredicted RBP12.61□□□□□ -0.39
ATM-222ENST00000533733 CDKN2BP42772 138 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 GABRB2P47870 512 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 CCNA1P78396 465 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 TAZQ16635 292 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 KYNUQ16719 465 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 LONRF1Q17RB8 773 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 P3H1Q32P28 736 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 C2CD6Q53TS8 623 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 LLGL2Q6P1M3 1020 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 CENPUQ71F23 418 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 PHLDB2Q86SQ0 1253 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 SUGP1Q8IWZ8 645 aaKnown RBP12.61□□□□□ -0.39
ATM-222ENST00000533733 LRRC71Q8N4P6 559 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 GBP7Q8N8V2 638 aaPredicted RBP12.61□□□□□ -0.39
ATM-222ENST00000533733 MDM1Q8TC05 714 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 EMID1Q96A84 441 aaPredicted RBP12.61□□□□□ -0.39
ATM-222ENST00000533733 GRAMD1AQ96CP6 724 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 OTUD5Q96G74 571 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 FAM84AQ96KN4 292 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 RBM15Q96T37 977 aaKnown RBP eCLIP12.61□□□□□ -0.39
ATM-222ENST00000533733 DDX23Q9BUQ8 820 aaKnown RBP12.61□□□□□ -0.39
ATM-222ENST00000533733 ELP3Q9H9T3 547 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 VTA1Q9NP79 307 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 IVNS1ABPQ9Y6Y0 642 aa12.61□□□□□ -0.39
ATM-222ENST00000533733 C22orf31O95567 290 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 VDRP11473 427 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 PSMA2P25787 234 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms